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Sample GSM550323 Query DataSets for GSM550323
Status Public on Aug 11, 2010
Title WB-H-6422
Sample type RNA
 
Source name Human whole blood
Organism Homo sapiens
Characteristics age: 33
gender: Female
ethnicity: Caucasian
healthy control: Still
Extracted molecule total RNA
Extraction protocol Ambion Temput Isolation kit
Label biotin
Label protocol Biotynlated cRNA were generated following manufacturer protocols using the Illumina TotalPrep Amplification Kit from Ambion.
 
Hybridization protocol Hybridized 12-Sample Beadchip according to manufacturer protocol
Scan protocol SentrixScanVersion 2.3.0.13 (This information is in the .XML file)
Description Whole blood was collected in Tempus tube
Data processing The data were analyzed using BeadStudio version 1.5.1.3 using the average chip normalization method.
 
Submission date Jun 03, 2010
Last update date Aug 11, 2010
Contact name Damien Chaussabel
E-mail(s) [email protected]
Organization name Baylor Institute for Immunology Research
Street address 3434 Live Oak
City Dallas
State/province TX
ZIP/Postal code 75204
Country USA
 
Platform ID GPL6947
Series (2)
GSE19491 Blood Transcriptional Profiles in Human Active and Latent Tuberculosis
GSE22098 Whole blood transcriptional profiles of patients with active tuberculosis (TB) and other inflammatory and infectious diseases

Data table header descriptions
ID_REF ID
VALUE Illumina-calculated Signal intensity
Detection Illumina detection call

Data table
ID_REF VALUE Detection
ILMN_1809034 20.45275 0.04216074
ILMN_1660305 151.452 0.001317523
ILMN_1792173 116.8721 0.001317523
ILMN_1762337 -9.395945 0.9077734
ILMN_2055271 20.27513 0.04216074
ILMN_1736007 -2.774696 0.4953887
ILMN_1814316 -5.504371 0.6534914
ILMN_2359168 -4.233705 0.5770751
ILMN_1731507 -8.457294 0.8616601
ILMN_1787689 9.744095 0.1027668
ILMN_1745607 -2.97604 0.5059289
ILMN_2136495 -6.434953 0.7246377
ILMN_1668111 -14.47306 1
ILMN_2295559 -0.9455587 0.4031621
ILMN_1735045 -4.734632 0.6034256
ILMN_1680754 10.12596 0.1001318
ILMN_2375184 9.489385 0.1040843
ILMN_1659452 13.39289 0.06719368
ILMN_1767388 -1.238327 0.4189723
ILMN_1675204 -11.70969 0.9841897

Total number of rows: 48803

Table truncated, full table size 1496 Kbytes.




Supplementary file Size Download File type/resource
GSM550323_4335991003_D_Raw.txt.gz 530.2 Kb (ftp)(http) TXT
Processed data included within Sample table

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