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Sample GSM549491 Query DataSets for GSM549491
Status Public on Aug 11, 2010
Title WB-PSLE-8074
Sample type RNA
 
Source name Human whole blood
Organism Homo sapiens
Characteristics age: 18
gender: Female
ethnicity: Hispanic
illness: PSLE
Extracted molecule total RNA
Extraction protocol Ambion Temput Isolation kit
Label biotin
Label protocol Biotynlated cRNA were generated following manufacturer protocols using the Illumina TotalPrep Amplification Kit from Ambion.
 
Hybridization protocol Hybridized 12-Sample Beadchip according to manufacturer protocol
Scan protocol SentrixScanVersion 2.3.0.13 (This information is in the .XML file)
Description Whole blood was collected in Tempus tube
Data processing The data were analyzed using BeadStudio version 1.5.1.3 using the average chip normalization method.
 
Submission date Jun 02, 2010
Last update date Aug 11, 2010
Contact name Damien Chaussabel
E-mail(s) [email protected]
Organization name Baylor Institute for Immunology Research
Street address 3434 Live Oak
City Dallas
State/province TX
ZIP/Postal code 75204
Country USA
 
Platform ID GPL6947
Series (2)
GSE19491 Blood Transcriptional Profiles in Human Active and Latent Tuberculosis
GSE22098 Whole blood transcriptional profiles of patients with active tuberculosis (TB) and other inflammatory and infectious diseases

Data table header descriptions
ID_REF ID
VALUE Illumina-calculated Signal intensity
Detection Illumina detection call

Data table
ID_REF VALUE Detection
ILMN_1762337 -2.353262 0.5981554
ILMN_2055271 5.183447 0.2002635
ILMN_1736007 -0.4769554 0.4769433
ILMN_2383229 4.346489 0.2305665
ILMN_1806310 3.360653 0.2793149
ILMN_1779670 12.00252 0.06719368
ILMN_2321282 4.648863 0.2213439
ILMN_1671474 5.87319 0.1778656
ILMN_1772582 -3.151866 0.6376812
ILMN_1735698 10.91859 0.07378129
ILMN_1653355 25.62546 0.006587615
ILMN_1717783 3.4022 0.2779974
ILMN_1705025 6.566321 0.1594203
ILMN_1814316 -0.8144078 0.5046113
ILMN_2359168 2.713538 0.314888
ILMN_1731507 4.418929 0.2279315
ILMN_1787689 1.767794 0.3583663
ILMN_1745607 -1.976822 0.5757576
ILMN_2136495 2.300401 0.3333333
ILMN_1668111 -1.234588 0.5309618

Total number of rows: 48803

Table truncated, full table size 1472 Kbytes.




Supplementary file Size Download File type/resource
GSM549491_4856050053_B_Raw.txt.gz 528.1 Kb (ftp)(http) TXT
Processed data included within Sample table

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