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Sample GSM549469 Query DataSets for GSM549469
Status Public on Aug 11, 2010
Title WB-Staph-5069
Sample type RNA
 
Source name Human whole blood
Organism Homo sapiens
Characteristics age: 15
gender: Male
ethnicity: Caucasian
illness: Staph
Extracted molecule total RNA
Extraction protocol Ambion Temput Isolation kit
Label biotin
Label protocol Biotynlated cRNA were generated following manufacturer protocols using the Illumina TotalPrep Amplification Kit from Ambion.
 
Hybridization protocol Hybridized 12-Sample Beadchip according to manufacturer protocol
Scan protocol SentrixScanVersion 2.3.0.13 (This information is in the .XML file)
Description Whole blood was collected in Tempus tube
Data processing The data were analyzed using BeadStudio version 1.5.1.3 using the average chip normalization method.
 
Submission date Jun 02, 2010
Last update date Aug 11, 2010
Contact name Damien Chaussabel
E-mail(s) [email protected]
Organization name Baylor Institute for Immunology Research
Street address 3434 Live Oak
City Dallas
State/province TX
ZIP/Postal code 75204
Country USA
 
Platform ID GPL6947
Series (2)
GSE19491 Blood Transcriptional Profiles in Human Active and Latent Tuberculosis
GSE22098 Whole blood transcriptional profiles of patients with active tuberculosis (TB) and other inflammatory and infectious diseases

Data table header descriptions
ID_REF ID
VALUE Illumina-calculated Signal intensity
Detection Illumina detection call

Data table
ID_REF VALUE Detection
ILMN_1762337 -7.036418 0.8537549
ILMN_2055271 -0.1866562 0.4413702
ILMN_1736007 -3.142897 0.6231884
ILMN_2383229 -3.920879 0.6798419
ILMN_1806310 4.760826 0.2042161
ILMN_1779670 -3.904715 0.6798419
ILMN_2321282 -0.2191843 0.4426877
ILMN_1671474 0.7968397 0.3794466
ILMN_1772582 0.8391025 0.3768116
ILMN_1735698 -1.807929 0.5520422
ILMN_1653355 2.798778 0.2938077
ILMN_1717783 -5.442601 0.7773386
ILMN_1705025 -0.9235516 0.4940712
ILMN_1814316 -7.115324 0.8629776
ILMN_2359168 0.06085749 0.4268775
ILMN_1731507 -0.2504368 0.4479578
ILMN_1787689 8.880387 0.1054018
ILMN_1745607 -7.259981 0.8682477
ILMN_2136495 4.945095 0.1976285
ILMN_1668111 -2.432588 0.5810277

Total number of rows: 48803

Table truncated, full table size 1460 Kbytes.




Supplementary file Size Download File type/resource
GSM549469_4676163067_H_Raw.txt.gz 526.2 Kb (ftp)(http) TXT
Processed data included within Sample table

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