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Sample GSM549445 Query DataSets for GSM549445
Status Public on Aug 11, 2010
Title WB-Strep-8869
Sample type RNA
 
Source name Human whole blood
Organism Homo sapiens
Characteristics age: 1
gender: Female
ethnicity: Hispanic
illness: Strep
Extracted molecule total RNA
Extraction protocol Ambion Temput Isolation kit
Label biotin
Label protocol Biotynlated cRNA were generated following manufacturer protocols using the Illumina TotalPrep Amplification Kit from Ambion.
 
Hybridization protocol Hybridized 12-Sample Beadchip according to manufacturer protocol
Scan protocol SentrixScanVersion 2.3.0.13 (This information is in the .XML file)
Description Whole blood was collected in Tempus tube
Data processing The data were analyzed using BeadStudio version 1.5.1.3 using the average chip normalization method.
 
Submission date Jun 02, 2010
Last update date Aug 11, 2010
Contact name Damien Chaussabel
E-mail(s) [email protected]
Organization name Baylor Institute for Immunology Research
Street address 3434 Live Oak
City Dallas
State/province TX
ZIP/Postal code 75204
Country USA
 
Platform ID GPL6947
Series (2)
GSE19491 Blood Transcriptional Profiles in Human Active and Latent Tuberculosis
GSE22098 Whole blood transcriptional profiles of patients with active tuberculosis (TB) and other inflammatory and infectious diseases

Data table header descriptions
ID_REF ID
VALUE Illumina-calculated Signal intensity
Detection Illumina detection call

Data table
ID_REF VALUE Detection
ILMN_1762337 -5.184199 0.8194993
ILMN_2055271 -3.012607 0.6772069
ILMN_1736007 4.364434 0.1936759
ILMN_2383229 -2.351542 0.6218709
ILMN_1806310 -3.865706 0.7417655
ILMN_1779670 -4.158107 0.7628459
ILMN_2321282 1.819341 0.3241107
ILMN_1671474 -1.404785 0.5586298
ILMN_1772582 -7.365828 0.9288538
ILMN_1735698 -0.4134956 0.4822134
ILMN_1653355 16.90376 0.01449275
ILMN_1717783 -4.220593 0.7694334
ILMN_1705025 1.519817 0.3412385
ILMN_1814316 -7.559901 0.9354414
ILMN_2359168 0.06248417 0.4374177
ILMN_1731507 -3.901431 0.743083
ILMN_1787689 11.06178 0.04084321
ILMN_1745607 -3.574456 0.7259552
ILMN_2136495 -2.510344 0.6310936
ILMN_1668111 -7.375786 0.9288538

Total number of rows: 48803

Table truncated, full table size 1485 Kbytes.




Supplementary file Size Download File type/resource
GSM549445_4676163060_E_Raw.txt.gz 527.7 Kb (ftp)(http) TXT
Processed data included within Sample table

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