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Sample GSM549441 Query DataSets for GSM549441
Status Public on Aug 11, 2010
Title WB-Strep-2736
Sample type RNA
 
Source name Human whole blood
Organism Homo sapiens
Characteristics age: 1
gender: Male
ethnicity: Hispanic
illness: Strep
Extracted molecule total RNA
Extraction protocol Ambion Temput Isolation kit
Label biotin
Label protocol Biotynlated cRNA were generated following manufacturer protocols using the Illumina TotalPrep Amplification Kit from Ambion.
 
Hybridization protocol Hybridized 12-Sample Beadchip according to manufacturer protocol
Scan protocol SentrixScanVersion 2.3.0.13 (This information is in the .XML file)
Description Whole blood was collected in Tempus tube
Data processing The data were analyzed using BeadStudio version 1.5.1.3 using the average chip normalization method.
 
Submission date Jun 02, 2010
Last update date Aug 11, 2010
Contact name Damien Chaussabel
E-mail(s) [email protected]
Organization name Baylor Institute for Immunology Research
Street address 3434 Live Oak
City Dallas
State/province TX
ZIP/Postal code 75204
Country USA
 
Platform ID GPL6947
Series (2)
GSE19491 Blood Transcriptional Profiles in Human Active and Latent Tuberculosis
GSE22098 Whole blood transcriptional profiles of patients with active tuberculosis (TB) and other inflammatory and infectious diseases

Data table header descriptions
ID_REF ID
VALUE Illumina-calculated Signal intensity
Detection Illumina detection call

Data table
ID_REF VALUE Detection
ILMN_1762337 -3.825537 0.7351779
ILMN_2055271 3.230584 0.2332016
ILMN_1736007 1.049234 0.3517787
ILMN_2383229 -2.829633 0.6469038
ILMN_1806310 0.3038398 0.4071146
ILMN_1779670 1.271597 0.3399209
ILMN_2321282 2.905701 0.2490119
ILMN_1671474 -4.781226 0.7957839
ILMN_1772582 1.713631 0.3056653
ILMN_1735698 5.797903 0.14361
ILMN_1653355 8.110659 0.09486166
ILMN_1717783 -3.719614 0.7259552
ILMN_1705025 -2.273942 0.6152833
ILMN_1814316 -7.611294 0.9222661
ILMN_2359168 -4.160312 0.7562582
ILMN_1731507 1.363004 0.3306983
ILMN_1787689 8.561136 0.085639
ILMN_1745607 4.404135 0.1884058
ILMN_2136495 1.909058 0.2898551
ILMN_1668111 -6.507734 0.8801054

Total number of rows: 48803

Table truncated, full table size 1463 Kbytes.




Supplementary file Size Download File type/resource
GSM549441_4676163060_A_Raw.txt.gz 527.0 Kb (ftp)(http) TXT
Processed data included within Sample table

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