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Sample GSM549424 Query DataSets for GSM549424
Status Public on Aug 11, 2010
Title WB-Staph-1344
Sample type RNA
 
Source name Human whole blood
Organism Homo sapiens
Characteristics age: 11
gender: Male
ethnicity: Caucasian
illness: Staph
Extracted molecule total RNA
Extraction protocol Ambion Temput Isolation kit
Label biotin
Label protocol Biotynlated cRNA were generated following manufacturer protocols using the Illumina TotalPrep Amplification Kit from Ambion.
 
Hybridization protocol Hybridized 12-Sample Beadchip according to manufacturer protocol
Scan protocol SentrixScanVersion 2.3.0.13 (This information is in the .XML file)
Description Whole blood was collected in Tempus tube
Data processing The data were analyzed using BeadStudio version 1.5.1.3 using the average chip normalization method.
 
Submission date Jun 02, 2010
Last update date Aug 11, 2010
Contact name Damien Chaussabel
E-mail(s) [email protected]
Organization name Baylor Institute for Immunology Research
Street address 3434 Live Oak
City Dallas
State/province TX
ZIP/Postal code 75204
Country USA
 
Platform ID GPL6947
Series (2)
GSE19491 Blood Transcriptional Profiles in Human Active and Latent Tuberculosis
GSE22098 Whole blood transcriptional profiles of patients with active tuberculosis (TB) and other inflammatory and infectious diseases

Data table header descriptions
ID_REF ID
VALUE Illumina-calculated Signal intensity
Detection Illumina detection call

Data table
ID_REF VALUE Detection
ILMN_1762337 -11.70955 0.9828722
ILMN_2055271 0.5487418 0.3491436
ILMN_1736007 2.802085 0.2766798
ILMN_2383229 -5.580944 0.7931489
ILMN_1806310 3.771559 0.2358366
ILMN_1779670 5.731796 0.1633729
ILMN_2321282 7.610729 0.1277997
ILMN_1671474 -7.97357 0.9025033
ILMN_1772582 -2.688914 0.5731225
ILMN_1735698 -0.03795145 0.3833992
ILMN_1653355 17.51548 0.03952569
ILMN_1717783 -0.2107105 0.3952569
ILMN_1705025 -0.2920249 0.397892
ILMN_1814316 -5.458608 0.7760211
ILMN_2359168 -3.340654 0.6205534
ILMN_1731507 1.928277 0.3030303
ILMN_1787689 8.984749 0.1080369
ILMN_1745607 -6.873318 0.8603426
ILMN_2136495 -6.197338 0.8221344
ILMN_1668111 -6.75344 0.8511199

Total number of rows: 48803

Table truncated, full table size 1466 Kbytes.




Supplementary file Size Download File type/resource
GSM549424_4676163047_C_Raw.txt.gz 527.0 Kb (ftp)(http) TXT
Processed data included within Sample table

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