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Sample GSM549382 Query DataSets for GSM549382
Status Public on Aug 11, 2010
Title WB-ASLE-2773
Sample type RNA
 
Source name Human whole blood
Organism Homo sapiens
Characteristics age: 21
gender: Male
ethnicity: Hispanic
illness: ASLE
Extracted molecule total RNA
Extraction protocol Ambion Temput Isolation kit
Label biotin
Label protocol Biotynlated cRNA were generated following manufacturer protocols using the Illumina TotalPrep Amplification Kit from Ambion.
 
Hybridization protocol Hybridized 12-Sample Beadchip according to manufacturer protocol
Scan protocol SentrixScanVersion 2.3.0.13 (This information is in the .XML file)
Description Whole blood was collected in Tempus tube
Data processing The data were analyzed using BeadStudio version 1.5.1.3 using the average chip normalization method.
 
Submission date Jun 02, 2010
Last update date Aug 11, 2010
Contact name Damien Chaussabel
E-mail(s) [email protected]
Organization name Baylor Institute for Immunology Research
Street address 3434 Live Oak
City Dallas
State/province TX
ZIP/Postal code 75204
Country USA
 
Platform ID GPL6947
Series (2)
GSE19491 Blood Transcriptional Profiles in Human Active and Latent Tuberculosis
GSE22098 Whole blood transcriptional profiles of patients with active tuberculosis (TB) and other inflammatory and infectious diseases

Data table header descriptions
ID_REF ID
VALUE Illumina-calculated Signal intensity
Detection Illumina detection call

Data table
ID_REF VALUE Detection
ILMN_1762337 10.9476 0.09222662
ILMN_2055271 1.731349 0.397892
ILMN_1736007 10.63896 0.0974967
ILMN_2383229 4.237772 0.2938077
ILMN_1806310 0.1072823 0.4756258
ILMN_1779670 -1.452168 0.5283267
ILMN_2321282 -5.125829 0.7114624
ILMN_1671474 11.50415 0.08168643
ILMN_1772582 18.46859 0.03030303
ILMN_1735698 6.260524 0.2160738
ILMN_1653355 0.1120017 0.4756258
ILMN_1717783 -9.347926 0.8590251
ILMN_1705025 13.00531 0.06192358
ILMN_1814316 -4.604448 0.6758893
ILMN_2359168 5.902673 0.2252964
ILMN_1731507 -9.586735 0.8708827
ILMN_1787689 -6.15497 0.7536232
ILMN_1745607 -3.196047 0.6126482
ILMN_2136495 25.59797 0.01054018
ILMN_1668111 -10.41594 0.8893281

Total number of rows: 48803

Table truncated, full table size 1502 Kbytes.




Supplementary file Size Download File type/resource
GSM549382_4487653205_A_Raw.txt.gz 527.6 Kb (ftp)(http) TXT
Processed data included within Sample table

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