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Sample GSM549376 Query DataSets for GSM549376
Status Public on Aug 11, 2010
Title WB-ASLE-7984
Sample type RNA
 
Source name Human whole blood
Organism Homo sapiens
Characteristics age: 18
gender: Female
ethnicity: Caucasian
illness: ASLE
Extracted molecule total RNA
Extraction protocol Ambion Temput Isolation kit
Label biotin
Label protocol Biotynlated cRNA were generated following manufacturer protocols using the Illumina TotalPrep Amplification Kit from Ambion.
 
Hybridization protocol Hybridized 12-Sample Beadchip according to manufacturer protocol
Scan protocol SentrixScanVersion 2.3.0.13 (This information is in the .XML file)
Description Whole blood was collected in Tempus tube
Data processing The data were analyzed using BeadStudio version 1.5.1.3 using the average chip normalization method.
 
Submission date Jun 02, 2010
Last update date Aug 11, 2010
Contact name Damien Chaussabel
E-mail(s) [email protected]
Organization name Baylor Institute for Immunology Research
Street address 3434 Live Oak
City Dallas
State/province TX
ZIP/Postal code 75204
Country USA
 
Platform ID GPL6947
Series (2)
GSE19491 Blood Transcriptional Profiles in Human Active and Latent Tuberculosis
GSE22098 Whole blood transcriptional profiles of patients with active tuberculosis (TB) and other inflammatory and infectious diseases

Data table header descriptions
ID_REF ID
VALUE Illumina-calculated Signal intensity
Detection Illumina detection call

Data table
ID_REF VALUE Detection
ILMN_1762337 -1.084204 0.486166
ILMN_2055271 5.886682 0.1910408
ILMN_1736007 -0.402111 0.4532279
ILMN_2383229 4.994187 0.2108037
ILMN_1806310 -4.342864 0.6627141
ILMN_1779670 -1.636535 0.513834
ILMN_2321282 14.39491 0.05665349
ILMN_1671474 1.58764 0.3504611
ILMN_1772582 7.740875 0.1396574
ILMN_1735698 -5.823672 0.7351779
ILMN_1653355 27.73395 0.01185771
ILMN_1717783 -9.753177 0.9156785
ILMN_1705025 11.94068 0.08036891
ILMN_1814316 3.645978 0.2635046
ILMN_2359168 -6.976717 0.7957839
ILMN_1731507 -4.310014 0.6613966
ILMN_1787689 4.135432 0.2411067
ILMN_1745607 6.776485 0.1594203
ILMN_2136495 -6.320758 0.7667984
ILMN_1668111 -10.51271 0.9288538

Total number of rows: 48803

Table truncated, full table size 1502 Kbytes.




Supplementary file Size Download File type/resource
GSM549376_4487653182_F_Raw.txt.gz 532.5 Kb (ftp)(http) TXT
Processed data included within Sample table

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