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Sample GSM549372 Query DataSets for GSM549372
Status Public on Aug 11, 2010
Title WB-ASLE-6650
Sample type RNA
 
Source name Human whole blood
Organism Homo sapiens
Characteristics age: 37
gender: Female
ethnicity: Caucasian
illness: ASLE
Extracted molecule total RNA
Extraction protocol Ambion Temput Isolation kit
Label biotin
Label protocol Biotynlated cRNA were generated following manufacturer protocols using the Illumina TotalPrep Amplification Kit from Ambion.
 
Hybridization protocol Hybridized 12-Sample Beadchip according to manufacturer protocol
Scan protocol SentrixScanVersion 2.3.0.13 (This information is in the .XML file)
Description Whole blood was collected in Tempus tube
Data processing The data were analyzed using BeadStudio version 1.5.1.3 using the average chip normalization method.
 
Submission date Jun 02, 2010
Last update date Aug 11, 2010
Contact name Damien Chaussabel
E-mail(s) [email protected]
Organization name Baylor Institute for Immunology Research
Street address 3434 Live Oak
City Dallas
State/province TX
ZIP/Postal code 75204
Country USA
 
Platform ID GPL6947
Series (2)
GSE19491 Blood Transcriptional Profiles in Human Active and Latent Tuberculosis
GSE22098 Whole blood transcriptional profiles of patients with active tuberculosis (TB) and other inflammatory and infectious diseases

Data table header descriptions
ID_REF ID
VALUE Illumina-calculated Signal intensity
Detection Illumina detection call

Data table
ID_REF VALUE Detection
ILMN_1762337 -7.131258 0.8458498
ILMN_2055271 19.60479 0.01581028
ILMN_1736007 1.015122 0.3860343
ILMN_2383229 -0.4863187 0.483531
ILMN_1806310 12.29176 0.0513834
ILMN_1779670 -0.2599526 0.4650856
ILMN_2321282 12.87992 0.04479579
ILMN_1671474 5.057041 0.2028985
ILMN_1772582 3.28373 0.2700922
ILMN_1735698 8.079633 0.1238472
ILMN_1653355 13.32085 0.04216074
ILMN_1717783 3.976119 0.2424242
ILMN_1705025 14.71937 0.03030303
ILMN_1814316 -9.61795 0.942029
ILMN_2359168 -1.041777 0.5204216
ILMN_1731507 2.841677 0.2911726
ILMN_1787689 -2.950473 0.6403162
ILMN_1745607 0.2863272 0.4295125
ILMN_2136495 2.003341 0.3320158
ILMN_1668111 -14.66831 0.9934124

Total number of rows: 48803

Table truncated, full table size 1464 Kbytes.




Supplementary file Size Download File type/resource
GSM549372_4487653182_B_Raw.txt.gz 524.6 Kb (ftp)(http) TXT
Processed data included within Sample table

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