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Sample GSM549356 Query DataSets for GSM549356
Status Public on Aug 11, 2010
Title WB-Still-7759
Sample type RNA
 
Source name Human whole blood
Organism Homo sapiens
Characteristics age: 59
gender: Male
ethnicity: Caucasian
illness: Still
Extracted molecule total RNA
Extraction protocol Ambion Temput Isolation kit
Label biotin
Label protocol Biotynlated cRNA were generated following manufacturer protocols using the Illumina TotalPrep Amplification Kit from Ambion.
 
Hybridization protocol Hybridized 12-Sample Beadchip according to manufacturer protocol
Scan protocol SentrixScanVersion 2.3.0.13 (This information is in the .XML file)
Description Whole blood was collected in Tempus tube
Data processing The data were analyzed using BeadStudio version 1.5.1.3 using the average chip normalization method.
 
Submission date Jun 02, 2010
Last update date Aug 11, 2010
Contact name Damien Chaussabel
E-mail(s) [email protected]
Organization name Baylor Institute for Immunology Research
Street address 3434 Live Oak
City Dallas
State/province TX
ZIP/Postal code 75204
Country USA
 
Platform ID GPL6947
Series (2)
GSE19491 Blood Transcriptional Profiles in Human Active and Latent Tuberculosis
GSE22098 Whole blood transcriptional profiles of patients with active tuberculosis (TB) and other inflammatory and infectious diseases

Data table header descriptions
ID_REF ID
VALUE Illumina-calculated Signal intensity
Detection Illumina detection call

Data table
ID_REF VALUE Detection
ILMN_1809034 22.01941 0.01185771
ILMN_1660305 90.34507 0
ILMN_1792173 65.88291 0.002635046
ILMN_1762337 -0.1385182 0.4374177
ILMN_2055271 -0.1314763 0.4374177
ILMN_1736007 6.779848 0.0974967
ILMN_1814316 -5.110339 0.8142292
ILMN_2359168 0.4630494 0.3781291
ILMN_1731507 -8.308385 0.9472991
ILMN_1787689 -1.969878 0.5797101
ILMN_1745607 -2.740597 0.6363636
ILMN_2136495 -3.451216 0.7035573
ILMN_1668111 -7.268619 0.9117259
ILMN_2295559 2.420262 0.2463768
ILMN_1735045 -3.834664 0.7338603
ILMN_1680754 -0.05495429 0.4321476
ILMN_2375184 0.4962037 0.3741766
ILMN_1659452 11.08853 0.04216074
ILMN_1767388 2.149688 0.256917
ILMN_1675204 -8.858497 0.9565217

Total number of rows: 48803

Table truncated, full table size 1478 Kbytes.




Supplementary file Size Download File type/resource
GSM549356_4461154022_E_Raw.txt.gz 525.2 Kb (ftp)(http) TXT
Processed data included within Sample table

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