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Sample GSM549345 Query DataSets for GSM549345
Status Public on Aug 11, 2010
Title WB-Still-5871
Sample type RNA
 
Source name Human whole blood
Organism Homo sapiens
Characteristics age: 31
gender: Male
ethnicity: Caucasian
illness: Still
Extracted molecule total RNA
Extraction protocol Ambion Temput Isolation kit
Label biotin
Label protocol Biotynlated cRNA were generated following manufacturer protocols using the Illumina TotalPrep Amplification Kit from Ambion.
 
Hybridization protocol Hybridized 12-Sample Beadchip according to manufacturer protocol
Scan protocol SentrixScanVersion 2.3.0.13 (This information is in the .XML file)
Description Whole blood was collected in Tempus tube
Data processing The data were analyzed using BeadStudio version 1.5.1.3 using the average chip normalization method.
 
Submission date Jun 02, 2010
Last update date Aug 11, 2010
Contact name Damien Chaussabel
E-mail(s) [email protected]
Organization name Baylor Institute for Immunology Research
Street address 3434 Live Oak
City Dallas
State/province TX
ZIP/Postal code 75204
Country USA
 
Platform ID GPL6947
Series (2)
GSE19491 Blood Transcriptional Profiles in Human Active and Latent Tuberculosis
GSE22098 Whole blood transcriptional profiles of patients with active tuberculosis (TB) and other inflammatory and infectious diseases

Data table header descriptions
ID_REF ID
VALUE Illumina-calculated Signal intensity
Detection Illumina detection call

Data table
ID_REF VALUE Detection
ILMN_1809034 54.59674 0.001317523
ILMN_1660305 116.9303 0
ILMN_1792173 118.7698 0
ILMN_1762337 -2.431235 0.6047431
ILMN_2055271 4.657858 0.171278
ILMN_1736007 -4.178745 0.7206851
ILMN_1814316 0.08963712 0.4057971
ILMN_2359168 -5.388 0.7918314
ILMN_1731507 -5.712732 0.8234519
ILMN_1787689 -7.164846 0.8972332
ILMN_1745607 2.271197 0.2819499
ILMN_2136495 1.145584 0.342556
ILMN_1668111 -1.014842 0.4756258
ILMN_2295559 -4.315224 0.7285903
ILMN_1735045 5.416834 0.1462451
ILMN_1680754 -2.883954 0.6403162
ILMN_2375184 9.610658 0.07773386
ILMN_1659452 1.597557 0.3201581
ILMN_1767388 -0.264175 0.4268775
ILMN_1675204 -8.103708 0.9433465

Total number of rows: 48803

Table truncated, full table size 1482 Kbytes.




Supplementary file Size Download File type/resource
GSM549345_4424548046_G_Raw.txt.gz 525.5 Kb (ftp)(http) TXT
Processed data included within Sample table

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