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Sample GSM549324 Query DataSets for GSM549324
Status Public on Aug 11, 2010
Title WB-Still-4639
Sample type RNA
 
Source name Human whole blood
Organism Homo sapiens
Characteristics age: 55
gender: Male
ethnicity: Caucasian
illness: Still
Extracted molecule total RNA
Extraction protocol Ambion Temput Isolation kit
Label biotin
Label protocol Biotynlated cRNA were generated following manufacturer protocols using the Illumina TotalPrep Amplification Kit from Ambion.
 
Hybridization protocol Hybridized 12-Sample Beadchip according to manufacturer protocol
Scan protocol SentrixScanVersion 2.3.0.13 (This information is in the .XML file)
Description Whole blood was collected in Tempus tube
Data processing The data were analyzed using BeadStudio version 1.5.1.3 using the average chip normalization method.
 
Submission date Jun 02, 2010
Last update date Aug 11, 2010
Contact name Damien Chaussabel
E-mail(s) [email protected]
Organization name Baylor Institute for Immunology Research
Street address 3434 Live Oak
City Dallas
State/province TX
ZIP/Postal code 75204
Country USA
 
Platform ID GPL6947
Series (2)
GSE19491 Blood Transcriptional Profiles in Human Active and Latent Tuberculosis
GSE22098 Whole blood transcriptional profiles of patients with active tuberculosis (TB) and other inflammatory and infectious diseases

Data table header descriptions
ID_REF ID
VALUE Illumina-calculated Signal intensity
Detection Illumina detection call

Data table
ID_REF VALUE Detection
ILMN_1809034 48.42276 0.003952569
ILMN_1660305 194.7211 0
ILMN_1792173 166.9093 0
ILMN_1762337 -3.483962 0.7285903
ILMN_2055271 6.10181 0.07641634
ILMN_1736007 2.372792 0.1870883
ILMN_1814316 -3.777459 0.7654809
ILMN_2359168 -3.56395 0.7404479
ILMN_1731507 -6.607898 0.9683794
ILMN_1787689 4.350519 0.113307
ILMN_1745607 0.5074068 0.3003953
ILMN_2136495 -3.141513 0.6890646
ILMN_1668111 -4.0596 0.7971014
ILMN_2295559 -3.483553 0.7285903
ILMN_1735045 -3.945971 0.7786561
ILMN_1680754 5.161357 0.09881423
ILMN_2375184 -0.8009844 0.4071146
ILMN_1659452 8.122356 0.0513834
ILMN_1767388 -1.670578 0.5204216
ILMN_1675204 -6.184317 0.9578393

Total number of rows: 48803

Table truncated, full table size 1474 Kbytes.




Supplementary file Size Download File type/resource
GSM549324_4325540010_E_Raw.txt.gz 525.8 Kb (ftp)(http) TXT
Processed data included within Sample table

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