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GEO accession:
Sample GSM52677
Query DataSets for GSM52677
Status
Public on Dec 20, 2005
Title
MO32_10
Sample type
RNA
Source name
Trizol extracted total RNA from uterine fibroid tissue.
Organism
Homo sapiens
Extracted molecule
total RNA
Description
Uterine fibroid tissue with mutated fumarate hydratase gene.
Submission date
May 30, 2005
Last update date
Dec 20, 2005
Contact name
Sakari Vanharanta
E-mail(s)
[email protected]
Organization name
University of Helsinki
Department
Translational Cancer Medicine Program
Lab
Vanharanta
Street address
Haartmaninkatu 8
City
Helsinki
ZIP/Postal code
00014
Country
Finland
Platform ID
GPL96
Series (1)
GSE2725
The effect of FH mutations on fibroid expression profile 2.
Data table header descriptions
ID_REF
VALUE
MAS 5.0 Algorithm (mean scaled to 100)
ABS_CALL
MAS 5.0 Absent, Marginal, Present call (Alpha1 = 0.05, Alpha2 = 0.065)
DETECTION P-VALUE
MAS 5.0 Detection p-value
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-BioB-5_at
39.7
P
0.004017
AFFX-BioB-M_at
70.5
P
0.00007
AFFX-BioB-3_at
69
P
0.000258
AFFX-BioC-5_at
81.7
P
0.000081
AFFX-BioC-3_at
68.6
P
0.000169
AFFX-BioDn-5_at
146.4
P
0.000169
AFFX-BioDn-3_at
683
P
0.000169
AFFX-CreX-5_at
1288.6
P
0.000044
AFFX-CreX-3_at
2008.3
P
0.000044
AFFX-DapX-5_at
5.1
A
0.327079
AFFX-DapX-M_at
1.1
A
0.724854
AFFX-DapX-3_at
1.3
A
0.969024
AFFX-LysX-5_at
0.6
A
0.749204
AFFX-LysX-M_at
1.8
A
0.783476
AFFX-LysX-3_at
3.6
A
0.574038
AFFX-PheX-5_at
0.4
A
0.9273
AFFX-PheX-M_at
0.7
A
0.843268
AFFX-PheX-3_at
4.4
A
0.783476
AFFX-ThrX-5_at
1.9
A
0.712257
AFFX-ThrX-M_at
3.1
A
0.631562
Total number of rows:
22283
Table truncated, full table size
579 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM52677.CEL.gz
3.4 Mb
(ftp)
(http)
CEL
GSM52677.EXP.gz
490 b
(ftp)
(http)
EXP
GSM52677.RPT.gz
944 b
(ftp)
(http)
RPT
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