NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM518504 Query DataSets for GSM518504
Status Public on Jun 16, 2010
Title 4823936053_K
Sample type RNA
 
Source name human primary adult adrenal cells
Organism Homo sapiens
Characteristics agent: control
Extracted molecule total RNA
Extraction protocol RNA was extracted with QIAGEN Rneasy plus mini kit in accordance with the prescribed protocol provided with the kit. Quality control was performed with Agilent Bioanalyser.
Label biotin
Label protocol Biotinylated cRNA were prepared with the Ambion MessageAmp kit for Illumina arrays
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description triplicate 1 (Basal)
Data processing The raw data is generated through GenomeStudio software. The raw data were normalised using quantile normalisation with IlluminaGUI in R. Genespring 11 software was used for subsequent data analysis.
 
Submission date Mar 08, 2010
Last update date Mar 08, 2010
Contact name yewei xing
E-mail(s) [email protected]
Phone 7067218779
Fax 7067218360
Organization name Medical College of Georgia
Department Physiology
Street address 1120 15th street
City Augusta
State/province GA
ZIP/Postal code 30912
Country USA
 
Platform ID GPL6947
Series (2)
GSE20669 Genome-wide analysis of adult adrenocortical cells gene expression after 48 h ACTH treatment
GSE20676 Genome-wide analysis of adrenocortical cells gene expression after 48 h ACTH treatment

Data table header descriptions
ID_REF
VALUE quantile normalized signal intensity
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_1910180 1.2503369 0.31357
ILMN_1725881 -0.30519366 0.92622
ILMN_1804174 -0.44631433 0.62846
ILMN_1796063 0.22113824 0.083
ILMN_1811966 -0.20152235 0.24111
ILMN_1668162 -0.25488067 0.6996
ILMN_1715600 -0.26714134 0.96047
ILMN_1912287 0.058566332 0.93676
ILMN_1889125 -0.10010767 0.58103
ILMN_1793729 0.070543766 0.90909
ILMN_2296644 0.021125555 0.97365
ILMN_1711283 -0.026093245 0.35573
ILMN_1682799 0.10389185 0.31225
ILMN_1909767 -0.3999498 0.18841
ILMN_1840770 -0.24228287 0.23847
ILMN_1906209 -0.458498 0.70092
ILMN_1665311 -0.33585978 0.77866
ILMN_1657235 -0.48711753 1
ILMN_1655444 0.06918836 0.20553
ILMN_1656744 -0.11694431 0.00264

Total number of rows: 48803

Table truncated, full table size 1487 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap