GEO Publications
Handout
NAR 2024 (latest)
NAR 2002 (original)
All publications
FAQ
MIAME
Email GEO
NCBI
>
GEO
>
Accession Display
Not logged in |
Login
GEO help:
Mouse over screen elements for information.
Scope:
Self
Platform
Samples
Series
Family
Format:
HTML
SOFT
MINiML
Amount:
Brief
Quick
GEO accession:
Sample GSM50189
Query DataSets for GSM50189
Status
Public on Jul 02, 2005
Title
HCT-15
Sample type
genomic
Source name
NCI60
Organism
Homo sapiens
Extracted molecule
genomic DNA
Description
colon cancer cell line
Submission date
May 03, 2005
Last update date
Nov 15, 2005
Contact name
William R. Sellers
E-mail(s)
[email protected]
Phone
617-632-5261
Fax
617-632-5417
URL
http://research.dfci.harvard.edu/sellerslab/index.html
Organization name
Dana-Farber Cancer Institute
Department
Medical Oncology
Lab
Sellers Lab
Street address
44 Binney Street
City
Boston
State/province
MA
ZIP/Postal code
02115
Country
USA
Platform ID
GPL2014
Series (1)
GSE2520
Affymetrix 100K SNP array data-
Data table header descriptions
ID_REF
Affymetrix SNPID
VALUE
Genotypes: 0==AA, 1==AB, 2==BB, -1==NC
pValue
detection P-value
MedianS
Median Signal
RAS1
Relative allele signal for the data in the first probe group
RAS2
Relative allele signal for the data in the second probe group
Data table
ID_REF
VALUE
pValue
MedianS
RAS1
RAS2
157
0
0.002441
19.766
0.997094
0.913923
1546
2
0.001465
8.270
0.131197
0.083175
2144
2
0.000488
18.177
0.000000
0.000000
2249
0
0.000488
20.508
1.000000
1.000000
2279
2
0.033203
4.922
0.060744
0.145167
2399
1
0.011719
10.347
0.487607
0.607936
2403
0
0.000488
21.212
1.000000
0.889818
2451
2
0.003906
12.738
0.055009
0.064025
2613
2
0.001465
15.692
0.027644
0.022484
2839
1
0.011719
11.241
0.438560
0.390203
2841
2
0.000488
15.533
0.075002
0.042660
2928
2
0.000488
13.500
0.000000
0.041306
2998
2
0.028320
18.726
0.036026
0.000000
3117
0
0.000488
12.042
1.000000
1.000000
3533
0
0.001465
8.821
0.998671
0.890072
3534
0
0.028320
7.890
0.922630
0.875000
3847
-1
0.262207
3.632
0.911577
0.573564
3849
2
0.032227
9.154
0.018187
0.260335
4034
2
0.008301
7.687
0.116406
0.076074
4363
0
0.001465
15.574
1.000000
1.000000
Total number of rows:
63378
Table truncated, full table size
2680 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM50189.CEL.gz
19.0 Mb
(ftp)
(http)
CEL
|
NLM
|
NIH
|
GEO Help
|
Disclaimer
|
Accessibility
|
