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GEO accession:
Sample GSM49842
Query DataSets for GSM49842
Status
Public on Dec 13, 2006
Title
10.dom.brain
Sample type
RNA
Channel 1
Source name
C57BL6 brain (pool of 9 individuals)
Organism
Mus musculus
Extracted molecule
total RNA
Channel 2
Source name
Mus musculus domesticus brain
Organism
Mus musculus
Extracted molecule
total RNA
Description
gene expression in house mice, expression divergence in house mice in 3 tissues (brain, liver/kidney, testis)
Submission date
Apr 28, 2005
Last update date
Dec 13, 2006
Contact name
Christian Robert Voolstra
E-mail(s)
[email protected]
URL
http://faculty.kaust.edu.sa/sites/christianvoolstra/Pages/home.aspx
Organization name
King Abdullah University of Science and Technology
Street address
Red Sea Research Center
City
Thuwal
ZIP/Postal code
23955
Country
Saudi Arabia
Platform ID
GPL1942
Series (1)
GSE2597
Contrasting patterns of expression divergence in early and late stages of population divergence in mice
Data table header descriptions
ID_REF
IA
intensity for alexa dye555 (cy3) reference channel
IB
intensity for alexa dye647 (cy5) sample channel
VALUE
normalized (lowess print-tip sd regularization print-tip) log2 ratio (IB / IA)
FlagA
Flag for Channel A (A/B/C=good,X/Y/Z=bad)
FlagB
Flag for Channel B (A/B/C=good,X/Y/Z=bad)
Data table
ID_REF
IA
IB
VALUE
FlagA
FlagB
1
55860
52590
-0.087027077
X
X
2
66650
58119
-0.197594995
X
X
3
62206
57181
-0.12151789
X
B
4
0
0
null
Z
Z
5
52770
47141
-0.162735621
X
X
6
59144
47937
-0.303092194
X
X
7
52308
54107
0.048783643
X
X
8
66666
68554
0.04028968
X
B
9
87306
71905
-0.279988711
B
B
10
92374
72468
-0.350142763
C
C
11
56386
62720
0.153588557
B
B
12
69676
63267
-0.139208616
B
B
13
55682
53845
-0.048398648
X
X
14
45374
41476
-0.129589082
X
X
15
56434
54756
-0.043547551
X
X
16
66084
49536
-0.415823638
X
X
17
60818
49829
-0.287512753
X
X
18
35920
78502
1.12794206
C
C
19
50908
73248
0.52489698
B
B
20
40572
40686
0.004048028
X
X
Total number of rows:
46128
Table truncated, full table size
1513 Kbytes
.
Supplementary data files not provided
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