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GEO accession:
Sample GSM49834
Query DataSets for GSM49834
Status
Public on Dec 13, 2006
Title
03.dom.kidneyliver
Sample type
RNA
Channel 1
Source name
C57BL6 kidneyliver (pool of 9 individuals)
Organism
Mus musculus
Extracted molecule
total RNA
Channel 2
Source name
Mus musculus domesticus kidneyliver
Organism
Mus musculus
Extracted molecule
total RNA
Description
gene expression in house mice, expression divergence in house mice in 3 tissues (brain, liver/kidney, testis)
Submission date
Apr 28, 2005
Last update date
Dec 13, 2006
Contact name
Christian Robert Voolstra
E-mail(s)
[email protected]
URL
http://faculty.kaust.edu.sa/sites/christianvoolstra/Pages/home.aspx
Organization name
King Abdullah University of Science and Technology
Street address
Red Sea Research Center
City
Thuwal
ZIP/Postal code
23955
Country
Saudi Arabia
Platform ID
GPL1942
Series (1)
GSE2597
Contrasting patterns of expression divergence in early and late stages of population divergence in mice
Data table header descriptions
ID_REF
IA
intensity for alexa dye555 (cy3) reference channel
IB
intensity for alexa dye647 (cy5) sample channel
VALUE
normalized (lowess print-tip sd regularization print-tip) log2 ratio (IB / IA)
FlagA
Flag for Channel A (A/B/C=good,X/Y/Z=bad)
FlagB
Flag for Channel B (A/B/C=good,X/Y/Z=bad)
Data table
ID_REF
IA
IB
VALUE
FlagA
FlagB
1
49976
49597
-0.010982577
X
X
2
76382
72312
-0.078997617
X
X
3
120942
111312
-0.119706211
B
B
4
88210
94438
0.098425271
B
X
5
88642
79375
-0.159305746
X
X
6
44794
43493
-0.042522277
X
X
7
53202
57930
0.122830184
X
X
8
78906
76193
-0.050476546
X
X
9
107454
111045
0.047425246
B
B
10
101058
117452
0.216887747
B
B
11
91110
131791
0.532570538
C
C
12
102160
116949
0.195049095
C
C
13
92180
88878
-0.052627415
X
X
14
47754
45972
-0.054866151
X
X
15
82834
81533
-0.022838957
X
X
16
72804
69020
-0.077003243
X
X
17
93990
88047
-0.094233422
X
X
18
68044
64835
-0.069695117
X
X
19
58078
63165
0.121133603
X
X
20
100434
86784
-0.21074676
X
X
Total number of rows:
46128
Table truncated, full table size
1533 Kbytes
.
Supplementary data files not provided
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