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Sample GSM47948 Query DataSets for GSM47948
Status Public on Jul 28, 2005
Title PA Obese M 2 subB
Sample type RNA
 
Source name Primary cultured abdominal subcutaneous preadipocytes
Organism Homo sapiens
Extracted molecule total RNA
 
Description Source of cells: Subcutaneous abdominal fat needle biopsies were obtained from non-diabetic Pima Indians . Preadipocytes (stromal vascular cells) were obtained from collagenase digested adipose tissue from the infranatant after fat cells (adipocytes) were allowed to float to the top. The stromal vascular cells were cultured until subconfluency and RNA extracted from the harvested cells. Array type: Affymetrix HG-U133B. Subject: Obese male (PA-OM2)
Keywords = Obesity
Keywords = inflammation
Keywords = microarray
Keywords = gene expression
Keywords = preadipocyte
Keywords = stromal-vascular cells
Keywords = adipose tissue
 
Submission date Apr 08, 2005
Last update date Jul 28, 2005
Contact name Saraswathy Nair
E-mail(s) [email protected]
Phone 602-200-5361
Fax 602-200-5335
Organization name NIDDK, NIH
Department Phoenix Epidemiology and Clinical Research Branch
Lab Clinical Diabetes and Nutrition Section
Street address 4212 N. 16th Street
City Phoenix
State/province AZ
ZIP/Postal code 85016
Country USA
 
Platform ID GPL97
Series (1)
GSE2510 Expression profiling in preadipocytes in obese Pima Indians/humans

Data table header descriptions
ID_REF
VALUE 'signal' a measure of the abundance of a transcript
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION P-VALUE 'detection p-value', p-value that indicates the significance level of the detection call

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
200000_s_at 8635.9 P 0.000244
200001_at 77401.8 P 0.00293
200002_at 108682.8 P 0.000244
200003_s_at 194822 P 0.000244
200004_at 111817.7 P 0.000244
200005_at 31630.6 P 0.000244
200006_at 113643 P 0.000244
200007_at 81241.4 P 0.000244
200008_s_at 31370.9 P 0.000732
200009_at 64408.1 P 0.000244
200010_at 136455.5 P 0.000244
200011_s_at 15091 P 0.00415
200012_x_at 141226.8 P 0.000244
200013_at 151232.9 P 0.000244
200014_s_at 22820.6 P 0.000244
200015_s_at 71976.1 P 0.000732
200016_x_at 140482.7 P 0.000244
200017_at 174117.5 P 0.000244
200018_at 184580.7 P 0.000244
200019_s_at 93419.5 P 0.000244

Total number of rows: 22645

Table truncated, full table size 610 Kbytes.




Supplementary data files not provided

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