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Sample GSM47938 Query DataSets for GSM47938
Status Public on Jul 28, 2005
Title PA Lean M 6 subB
Sample type RNA
 
Source name Primary cultured abdominal subcutaneous preadipocytes
Organism Homo sapiens
Extracted molecule total RNA
 
Description Source of cells: Subcutaneous abdominal fat needle biopsies were obtained from non-diabetic Pima Indians . Preadipocytes (stromal vascular cells) were obtained from collagenase digested adipose tissue from the infranatant after fat cells (adipocytes) were allowed to float to the top. The stromal vascular cells were cultured until subconfluency and RNA extracted from the harvested cells. The array type used: Affymetrix HG-U133B. Subject: Lean male (PA-LM6)
Keywords = Obesity
Keywords = inflammation
Keywords = microarray
Keywords = gene expression
Keywords = preadipocyte
Keywords = stromal-vascular cells
Keywords = adipose tissue
 
Submission date Apr 08, 2005
Last update date Jul 28, 2005
Contact name Saraswathy Nair
E-mail(s) [email protected]
Phone 602-200-5361
Fax 602-200-5335
Organization name NIDDK, NIH
Department Phoenix Epidemiology and Clinical Research Branch
Lab Clinical Diabetes and Nutrition Section
Street address 4212 N. 16th Street
City Phoenix
State/province AZ
ZIP/Postal code 85016
Country USA
 
Platform ID GPL97
Series (1)
GSE2510 Expression profiling in preadipocytes in obese Pima Indians/humans

Data table header descriptions
ID_REF
VALUE 'signal' a measure of the abundance of a transcript
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION P-VALUE 'detection p-value', p-value that indicates the significance level of the detection call

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
200000_s_at 14687.9 P 0.000244
200001_at 75790.7 P 0.000732
200002_at 121945.9 P 0.000244
200003_s_at 239764.9 P 0.000244
200004_at 112015.7 P 0.000244
200005_at 42578.9 P 0.000244
200006_at 121332.8 P 0.000244
200007_at 123325.2 P 0.000244
200008_s_at 33861.8 P 0.000244
200009_at 66362.6 P 0.000244
200010_at 142490.3 P 0.000244
200011_s_at 19401.5 P 0.001953
200012_x_at 153963.4 P 0.000244
200013_at 152600.7 P 0.000244
200014_s_at 29259.1 P 0.000244
200015_s_at 91451.6 P 0.000732
200016_x_at 156171.8 P 0.000244
200017_at 194662.6 P 0.000244
200018_at 196815.2 P 0.000244
200019_s_at 109839.4 P 0.000244

Total number of rows: 22645

Table truncated, full table size 608 Kbytes.




Supplementary data files not provided

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