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Sample GSM46915 Query DataSets for GSM46915
Status Public on Mar 31, 2005
Title Colon - 29241
Sample type RNA
 
Source name Colon
Organism Homo sapiens
Extracted molecule total RNA
 
Description Quality metric = 28S to 18S: 1.42
Patient Age: 80-90
Gender: Female
Ethnic Background: Caucasian
Tobacco Use : No
Years of Tobacco Use: None
Alcohol Consumption?: No
Family History of Cancer?: Yes
Days from Patient Diagnosis to Excision: 13
Screening studies performed?: Yes
Diagnosis made by: Colonoscopy
Primary Site: Colon
Histology: Adenocarcinoma
 
Submission date Mar 31, 2005
Last update date Aug 28, 2018
Contact name Erin Curley
E-mail(s) [email protected]
Phone 602-343-8808
Fax 602-343-8440
URL http://www.intgen.org
Organization name IGC
Department
Lab expO
Street address 445 N. 5th Street
City Phoenix
State/province AZ
ZIP/Postal code 85004
Country USA
 
Platform ID GPL570
Series (1)
GSE2109 Expression Project for Oncology (expO)
Relations
Reanalyzed by GSE64985
Reanalyzed by GSE119087

Data table header descriptions
ID_REF The name of the probe set, blank for control probes
VALUE The signal value calculated by MAS5, normalized
ABS_CALL The detection value calculated by the MAS5
DETECTION P-VALUE The detection p-value calculated by the MAS5

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 654.5 P 0.000754
AFFX-BioB-M_at 773.5 P 0.000225
AFFX-BioB-3_at 499.7 P 0.000857
AFFX-BioC-5_at 1645.3 P 4.4e-005
AFFX-BioC-3_at 2053.2 P 4.4e-005
AFFX-BioDn-5_at 4406.7 P 4.4e-005
AFFX-BioDn-3_at 8267.8 P 4.4e-005
AFFX-CreX-5_at 17580.7 P 5.2e-005
AFFX-CreX-3_at 24849 P 4.4e-005
AFFX-DapX-5_at 84.3 P 0.023929
AFFX-DapX-M_at 548.9 P 0.001102
AFFX-DapX-3_at 1461.4 P 6e-005
AFFX-LysX-5_at 102.7 P 0.002275
AFFX-LysX-M_at 136.6 M 0.062929
AFFX-LysX-3_at 320.9 P 9.5e-005
AFFX-PheX-5_at 31.2 A 0.275129
AFFX-PheX-M_at 106.2 P 0.023929
AFFX-PheX-3_at 214.9 P 0.012547
AFFX-ThrX-5_at 21.3 A 0.39692
AFFX-ThrX-M_at 110.1 M 0.054213

Total number of rows: 54675

Table truncated, full table size 1446 Kbytes.




Supplementary file Size Download File type/resource
GSM46915.CEL.gz 8.3 Mb (ftp)(http) CEL
Processed data included within Sample table

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