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Sample GSM458769 Query DataSets for GSM458769
Status Public on Jun 04, 2010
Title Mutant 2
Sample type RNA
 
Source name Ihh mutant mouse colon 2
Organism Mus musculus
Characteristics tissue: colon
genotype/variation: Ihh mutant
Growth protocol P9 to p12 control or mutant mice were harvested and colon tissues were dissected out, put immediately into Trizol.
Extracted molecule total RNA
Extraction protocol Total RNA was isolated according to Trizol protocol.
Label biotin
Label protocol Standard Affy Array protocol by Gladstone Array Core
 
Hybridization protocol Standard Affy Array protocol by Gladstone Array Core
Scan protocol Standard Affy Array protocol by Gladstone Array Core
Description Gene expression data from Ihh mutant mice
Data processing RMA normalization
 
Submission date Oct 02, 2009
Last update date Jun 04, 2010
Contact name Xin Chen
E-mail(s) [email protected]
Phone (415) 502-6526
Fax (415) 502-4332
Organization name UCSF
Street address
City San Francisco
State/province CA
ZIP/Postal code 94143-0446
Country USA
 
Platform ID GPL6246
Series (1)
GSE18393 Gene expression of colon from control or VilCre;Ihhflox/flox mice

Data table header descriptions
ID_REF
VALUE log2 transformed signal intensity

Data table
ID_REF VALUE
10338001 12.23151
10338002 7.246976
10338003 10.65498
10338004 9.91895
10338005 2.584923
10338006 2.824588
10338007 3.263604
10338008 4.408231
10338009 9.066159
10338010 2.636798
10338011 6.55484
10338012 2.749117
10338013 2.512933
10338014 2.536637
10338015 2.547766
10338016 8.447213
10338017 13.40156
10338018 7.625216
10338019 5.984211
10338020 9.176178

Total number of rows: 35557

Table truncated, full table size 621 Kbytes.




Supplementary file Size Download File type/resource
GSM458769.CEL.gz 4.5 Mb (ftp)(http) CEL
Processed data included within Sample table

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