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Status
Public on Jun 02, 2005
Title
VPA 24hr treated2
Sample type
RNA
Source name
Liver
Organism
Rattus norvegicus Extracted molecule
total RNA
Description
Male SD rats were given a single dose of 2000mg/kg sodium valproate (VPA) using distilled water as vehicle. Animal was sacrificed 24hrs post-dosing. Total RNA was extracted using the RNA STAT-60 kit from Tel-Test inc. Approximately 10ug of RNA was labeled according to the standard Affymetrix protocol. Signal values were calculated using the MAS 5.0 algorithm, with global scaling to 1500
Submission date
Feb 22, 2005
Last update date
Jun 02, 2005
Contact name
Keith M Goldstein
E-mail(s)
[email protected] Organization name
Eli Lilly & Co.
Department
Investigative Toxicology
Lab
Keith Goldstein
Street address
Lilly Corporate Center
City
Indianapolis
State/province
IN
ZIP/Postal code
46285
Country
USA
Platform ID
GPL85 Series (1)
GSE2303 Rat liver response to Clofibrate, DEHP or VPA
Data table header descriptions ID_REF Affymetrix probeset ID
VALUE Signal from MAS5 with global scaling to 1500
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION P-VALUE 'detection p-value', p-value that indicates the significance level of the detection call
Data table ID_REF VALUE ABS_CALL DETECTION P-VALUE rc_AA799636_at
147.504074
M
0.05447
rc_AA859777_f_at
132.66037
A
0.234557
U15280_at
36.224606
A
0.849473
AF001953_at
541.353088
P
0.02786
U15425_at
109.841248
A
0.267463
rc_AA893933_at
434.893555
A
0.302547
rc_AI639320_at
162.455688
A
0.11716
X66870_at
1431.246826
P
0.006532
rc_AA891965_at
422.746307
P
0.035163
M75148_at
582.503418
A
0.234557
rc_AA944007_g_at
9209.730469
P
0.000219
M94548_at
11444.51856
P
0.000219
rc_AI638941_at
10.011083
A
0.980696
X90475cds_at
270.049866
A
0.218983
U25651_at
756.68634
P
0.003585
rc_AA875146_s_at
3904.095459
P
0.000388
S35751_f_at
9899.930664
P
0.000266
rc_AA800768_at
204.852448
P
0.009985
rc_AI230789_at
14.774166
A
0.602006
X75785_at
123.906212
P
0.002617
8799 301 Kbytes .Supplementary file Size Download File type/resource GSM42945.CEL.gz
2.1 Mb
(ftp) (http) CEL
GSM42945.CHP.gz
3.1 Mb
(ftp) (http) CHP
GSM42945.EXP.gz
504 b
(ftp) (http) EXP
Processed data provided as supplementary file
