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Status
Public on Jun 02, 2005
Title
VPA 48hr Veh3
Sample type
RNA
Source name
Liver
Organism
Rattus norvegicus Extracted molecule
total RNA
Description
Male SD rats were given a single dose of distilled water as a vehicle. Animal was sacrificed 48hrs post-dosing. Total RNA was extracted using the RNA STAT-60 kit from Tel-Test inc. Approximately 10ug of RNA was labeled according to the standard Affymetrix protocol. Signal values were calculated using the MAS 5.0 algorithm, with global scaling to 1500
Submission date
Feb 22, 2005
Last update date
Jun 02, 2005
Contact name
Keith M Goldstein
E-mail(s)
[email protected] Organization name
Eli Lilly & Co.
Department
Investigative Toxicology
Lab
Keith Goldstein
Street address
Lilly Corporate Center
City
Indianapolis
State/province
IN
ZIP/Postal code
46285
Country
USA
Platform ID
GPL85 Series (1)
GSE2303 Rat liver response to Clofibrate, DEHP or VPA
Data table header descriptions ID_REF Affymetrix probeset ID
VALUE Signal from MAS5 with global scaling to 1500
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION P-VALUE 'detection p-value', p-value that indicates the significance level of the detection call
Data table ID_REF VALUE ABS_CALL DETECTION P-VALUE rc_AA799636_at
133.870865
A
0.098054
rc_AA859777_f_at
55.405186
A
0.67917
U15280_at
69.532661
A
0.810313
AF001953_at
80.120667
A
0.581931
U15425_at
90.873695
A
0.418069
rc_AA893933_at
579.672363
A
0.234557
rc_AI639320_at
80.195007
A
0.234557
X66870_at
1545.365601
P
0.024711
rc_AA891965_at
708.824707
M
0.048995
M75148_at
500.253021
A
0.438361
rc_AA944007_g_at
8803.220703
P
0.000322
M94548_at
23696.0918
P
0.000219
rc_AI638941_at
29.223484
A
0.968664
X90475cds_at
187.564606
A
0.458816
U25651_at
640.734253
P
0.02786
rc_AA875146_s_at
3277.18042
P
0.000805
S35751_f_at
4701.027832
P
0.000266
rc_AA800768_at
127.91246
P
0.000959
rc_AI230789_at
24.006258
A
0.749276
X75785_at
95.770607
M
0.05447
8799 301 Kbytes .Supplementary file Size Download File type/resource GSM42904.CEL.gz
2.1 Mb
(ftp) (http) CEL
GSM42904.CHP.gz
3.2 Mb
(ftp) (http) CHP
GSM42904.EXP.gz
505 b
(ftp) (http) EXP
Processed data provided as supplementary file
