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Status
Public on Jun 02, 2005
Title
Clof 168hr treated3
Sample type
RNA
Source name
Liver
Organism
Rattus norvegicus Extracted molecule
total RNA
Description
Male SD rats were given a single dose of 1000mg/kg clofibrate using 0.9% saline as vehicle. Animal was sacrificed 168hrs post-dosing. Total RNA was extracted using the RNA STAT-60 kit from Tel-Test inc. Approximately 10ug of RNA was labeled according to the standard Affymetrix protocol. Signal values were calculated using the MAS 5.0 algorithm, with global scaling to 1500.
Submission date
Feb 21, 2005
Last update date
Jun 02, 2005
Contact name
Keith M Goldstein
E-mail(s)
[email protected] Organization name
Eli Lilly & Co.
Department
Investigative Toxicology
Lab
Keith Goldstein
Street address
Lilly Corporate Center
City
Indianapolis
State/province
IN
ZIP/Postal code
46285
Country
USA
Platform ID
GPL85 Series (1)
GSE2303 Rat liver response to Clofibrate, DEHP or VPA
Data table header descriptions ID_REF Affymetrix probeset ID
VALUE Signal from MAS5 with global scaling to 1500
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION P-VALUE 'detection p-value', p-value that indicates the significance level of the detection call
Data table ID_REF VALUE ABS_CALL DETECTION P-VALUE rc_AA799636_at
81.310646
A
0.52062
rc_AA859777_f_at
106.978157
A
0.52062
U15280_at
35.642761
A
0.901946
AF001953_at
173.910187
A
0.47938
U15425_at
162.630692
A
0.267463
rc_AA893933_at
517.13031
A
0.189687
rc_AI639320_at
73.048416
A
0.189687
X66870_at
1417.775269
P
0.031336
rc_AA891965_at
626.378357
P
0.017001
M75148_at
281.418457
A
0.397994
rc_AA944007_g_at
9598.626953
P
0.000266
M94548_at
15156.16797
P
0.000219
rc_AI638941_at
14.173166
A
0.983
X90475cds_at
165.763748
A
0.35869
U25651_at
536.241272
P
0.011447
rc_AA875146_s_at
4080.667969
P
0.002228
S35751_f_at
1275.613892
P
0.008689
rc_AA800768_at
148.237076
A
0.107301
rc_AI230789_at
64.407021
A
0.581931
X75785_at
109.382271
A
0.089405
8799 300 Kbytes .Supplementary file Size Download File type/resource GSM42880.CEL.gz
1.8 Mb
(ftp) (http) CEL
GSM42880.CHP.gz
2.7 Mb
(ftp) (http) CHP
GSM42880.EXP.gz
505 b
(ftp) (http) EXP
Processed data provided as supplementary file
