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Status
Public on Jun 02, 2005
Title
Clof 168hr treated1
Sample type
RNA
Source name
Liver
Organism
Rattus norvegicus Extracted molecule
total RNA
Description
Male SD rats were given a single dose of 1000mg/kg clofibrate using 0.9% saline as vehicle. Animal was sacrificed 168hrs post-dosing. Total RNA was extracted using the RNA STAT-60 kit from Tel-Test inc. Approximately 10ug of RNA was labeled according to the standard Affymetrix protocol. Signal values were calculated using the MAS 5.0 algorithm, with global scaling to 1500.
Submission date
Feb 21, 2005
Last update date
Jun 02, 2005
Contact name
Keith M Goldstein
E-mail(s)
[email protected] Organization name
Eli Lilly & Co.
Department
Investigative Toxicology
Lab
Keith Goldstein
Street address
Lilly Corporate Center
City
Indianapolis
State/province
IN
ZIP/Postal code
46285
Country
USA
Platform ID
GPL85 Series (1)
GSE2303 Rat liver response to Clofibrate, DEHP or VPA
Data table header descriptions ID_REF Affymetrix probeset ID
VALUE Signal from MAS5 with global scaling to 1500
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION P-VALUE 'detection p-value', p-value that indicates the significance level of the detection call
Data table ID_REF VALUE ABS_CALL DETECTION P-VALUE rc_AA799636_at
93.606781
A
0.250724
rc_AA859777_f_at
15.67509
A
0.933135
U15280_at
52.23365
A
0.901946
AF001953_at
199.935669
A
0.35869
U15425_at
93.240379
A
0.418069
rc_AA893933_at
427.906219
A
0.339558
rc_AI639320_at
198.562531
A
0.162935
X66870_at
1477.386475
P
0.02786
rc_AA891965_at
439.958984
A
0.07383
M75148_at
532.035034
A
0.250724
rc_AA944007_g_at
7285.337402
P
0.000388
M94548_at
18353.47852
P
0.000219
rc_AI638941_at
19.717653
A
0.960635
X90475cds_at
182.225037
A
0.418069
U25651_at
609.078308
P
0.017001
rc_AA875146_s_at
4633.813477
P
0.001892
S35751_f_at
2470.766602
P
0.000805
rc_AA800768_at
95.485214
M
0.048995
rc_AI230789_at
27.537498
A
0.765443
X75785_at
57.363087
A
0.11716
8799 300 Kbytes .Supplementary file Size Download File type/resource GSM42878.CEL.gz
1.8 Mb
(ftp) (http) CEL
GSM42878.CHP.gz
2.8 Mb
(ftp) (http) CHP
GSM42878.EXP.gz
504 b
(ftp) (http) EXP
Processed data provided as supplementary file
