NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM42580 Query DataSets for GSM42580
Status Public on Apr 06, 2005
Title ERa E2 A
Sample type RNA
 
Source name U2OS-ERa cells
Organism Homo sapiens
Extracted molecule total RNA
 
Description E2 treated 24 hrs
also known as Spe015
 
Submission date Feb 17, 2005
Last update date May 27, 2005
Contact name David George Monroe
E-mail(s) [email protected]
Phone 507-284-1926
Fax 507-284-2053
Organization name Mayo Clinic
Department Biochemistry and Molecular Biology
Street address 100 2nd St SW
City Rochester
State/province MN
ZIP/Postal code 55905
Country USA
 
Platform ID GPL201
Series (1)
GSE2292 U2OS-ERa, U2OS-ERb, and U2OS-ERab cells treated with 4HT or E2

Data table header descriptions
ID_REF
VALUE 'signal' a measure of the abundance of a transcript
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION P-VALUE 'detection p-value', p-value that indicates the significance level of the detection call

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 388.5 A 0.131361
AFFX-BioB-M_at 1046.4 P 0.013811
AFFX-BioB-3_at 679.8 P 0.021902
AFFX-BioC-5_at 2136.7 P 0.000662
AFFX-BioC-3_at 977.2 P 0.004484
AFFX-BioDn-5_at 1432.6 P 0.001102
AFFX-BioDn-3_at 11716.3 P 0.000446
AFFX-CreX-5_at 21075 P 0.000044
AFFX-CreX-3_at 42136.7 P 0.000044
AFFX-HUMISGF3A/M97935_5_at 462 P 0.009337
AFFX-HUMISGF3A/M97935_MA_at 1294.5 A 0.089478
AFFX-HUMISGF3A/M97935_MB_at 614 P 0.000581
AFFX-HUMISGF3A/M97935_3_at 1384 P 0.000581
AFFX-HUMRGE/M10098_5_at 98.6 A 0.58862
AFFX-HUMRGE/M10098_M_at 155.2 A 0.48511
AFFX-HUMRGE/M10098_3_at 549.9 A 0.39692
AFFX-HUMGAPDH/M33197_5_at 85411.4 P 0.000044
AFFX-HUMGAPDH/M33197_M_at 83317.1 P 0.000044
AFFX-HUMGAPDH/M33197_3_at 72021.4 P 0.000044
AFFX-HSAC07/X00351_5_at 59631.2 P 0.000044

Total number of rows: 8793

Table truncated, full table size 237 Kbytes.




Supplementary file Size Download File type/resource
GSM42580.CEL.gz 1.3 Mb (ftp)(http) CEL
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap