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Sample GSM4118718 Query DataSets for GSM4118718
Status Public on Nov 18, 2019
Title miR192 mimic-tranfected macrophages in the presence of anti-IL-6 Ab #4
Sample type RNA
 
Source name mouse bone marrow derived macrophages #4
Organism Mus musculus
Characteristics transfected rna: miR192 mimic
treated ab: anti-IL-6 Ab
Treatment protocol Control or miR192 mimic was transfected into mouse bone marrow-derived macrophages, and 24hrs later those cells were stimulated with R848 for additional 24hrs together with control or anti-IL-6 Ab in vitro.
Extracted molecule total RNA
Extraction protocol RNA samples were extracted from cells using RNesy mini kit (Qiagen).
Label Cy5
Label protocol Amino Allyl aRNA was synthesis by Amino Allyl MessageAmp II aRNA Amplification Kit (Ambion#1753). CyeDye Coupling and fragmentation were performed as the protocol supplied by TORAY Industries, Inc..
 
Hybridization protocol Hybridized for 16 h at 37 C with rotary shake (250 rpm). Hybridization buffer and washing protocol was followed by the protocol supplied by TORAY Industries, Inc..
Scan protocol 3D-Gene Scanner ((Toray Industries Inc., Tokyo, Japan) was used for scanning. Images were quantified using Extraction(Toray Industries Inc., Tokyo, Japan).
Description Gene expression in miR192 mimic-trasnfected ad anti-IL-6 Ab-treated macrophages
Data processing The raw data of each spot was normalized by substitution with a mean intensity of the background signal determined by all blank spots’ signal intensities of 95% confidence intervals.
 
Submission date Oct 11, 2019
Last update date Nov 19, 2019
Contact name Satoshi Kondo
Organization name Toray Industries,Inc.
Street address 10-1 tebiro 6-chome
City Kamakura
State/province Kanagawa
ZIP/Postal code 248-8555
Country Japan
 
Platform ID GPL22438
Series (1)
GSE138758 Investigation of molecular events underlying the miR192-mediated modulation of inflammatory response

Data table header descriptions
ID_REF
VALUE Normalized signal intensity

Data table
ID_REF VALUE
M200005345 365.4
M200005179 191.2
M200005157 129.6
M200005020 217.9
M200004998 10.9
M200002815 176.1
M200002791 1.8
M200002643 90.5
M200002616 41.6
M200002468 53.9
M200002447 44.6
M200002306 11.1
M200002281 10.3
M200003325 261.1
M200003141 91.5
M200003123 67.2
M200002976 226.6
M200002960 34.7
M200000665 1.3
M200000650 12.6

Total number of rows: 23473

Table truncated, full table size 359 Kbytes.




Supplementary file Size Download File type/resource
GSM4118718_QM63E19.txt.gz 494.1 Kb (ftp)(http) TXT
Processed data included within Sample table

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