|
| Status |
Public on Jul 01, 2010 |
| Title |
gir_root_4%glc_rep3 |
| Sample type |
RNA |
| |
|
| Source name |
gir mutant, 4% glucose treatment, excised root
|
| Organism |
Arabidopsis thaliana |
| Characteristics |
genotype: gir mutant
developmental stage: 21 days old
agent: 4% glucose
tissue: root
|
| Growth protocol |
1. Plants were grown on 0% glucose + 1/2 MS agar plate for 7 days.
2. Then, transfer seedlings to 0% glucose + 1/2 MS vertical agar plate
3. Then, transfer seedlings to 4% glucose + 1/2 MS vertical agar plate
4. The root tissues were excised for GeneChip analysis
|
| Extracted molecule |
total RNA |
| Extraction protocol |
QIAGEN RNeasy Plant Kit
|
| Label |
biotin
|
| Label protocol |
Standard labeling protocal of Affymetrix expression array
|
| |
|
| Hybridization protocol |
Standard hybridization protocal of Affymetrix expression array
|
| Scan protocol |
Standard scanning protocol of Affymetrix expression array
|
| Description |
NA
|
| Data processing |
MAS5.0
|
| |
|
| Submission date |
May 12, 2009 |
| Last update date |
Aug 15, 2018 |
| Contact name |
Wan-Hsing Cheng |
| E-mail(s) |
[email protected]
|
| Phone |
886-2-2787-1177
|
| Fax |
886-2-2782-7954
|
| Organization name |
Academia Sinica
|
| Department |
Institute of Plant and Microbial Biology
|
| Lab |
Plant Molecular Genetics
|
| Street address |
128, Section 2, Academia Road, Nankang
|
| City |
Taipei |
| ZIP/Postal code |
115 |
| Country |
Taiwan |
| |
|
| Platform ID |
GPL198 |
| Series (1) |
| GSE16056 |
Gene expression profile in root and flower mediated by GLUCOSE-INHIBITED ROOT ELONGATION1 (GIR1) |
|
| Relations |
| Reanalyzed by |
GSE118579 |
