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Status
Public on Jan 27, 2006
Title
GSL30, PR04M007v0
Sample type
RNA
Source name
medial gastrocnemius
Organism
Mus musculus Extracted molecule
total RNA
Description
Medial gastrocnemius removed from 8-month old muscle glycogen synthase WT or overexpressing mouse. RNA was extracted using GibcoBRL TRIzol Reagent and a Quiagen RNeasy kit. Targets were produced using standard Affymetrix procedures from about 5ug of total RNA.
Submission date
Jan 27, 2005
Last update date
May 29, 2005
Contact name
Peter Roach
E-mail(s)
[email protected] Phone
317-274-1583
Organization name
IU School of Medicine
Department
Street address
City
Indianapolis
State/province
IN
ZIP/Postal code
46202
Country
USA
Platform ID
GPL339 Series (1)
GSE2198 Comparison of transcripts from the anterior tibialis, gastrocnemius, and liver of glycogen synthase WT, GSL30 or KO mice
Data table header descriptions ID_REF
VALUE signal, a measure of the abundance of a transcript
ABS_CALL the call in an absolute analysis that indicates if the transcript was present(P), absent(A), marginal(M), or no call(NC)
DETECTION P-VALUE 'detection p-value', p-value that indicates the significance level of the detection call
Data table ID_REF VALUE ABS_CALL DETECTION P-VALUE AFFX-BioB-5_at
1039.30000
P
0.00044
AFFX-BioB-M_at
1194.80000
P
0.00016
AFFX-BioB-3_at
623.10000
P
0.00255
AFFX-BioC-5_at
1953.50000
P
0.00011
AFFX-BioC-3_at
1463.20000
P
0.00008
AFFX-BioDn-5_at
1548.40000
P
0.00005
AFFX-BioDn-3_at
10386.20000
P
0.00016
AFFX-CreX-5_at
14946.00000
P
0.00004
AFFX-CreX-3_at
27529.00000
P
0.00004
AFFX-DapX-5_at
38.10000
A
0.50000
AFFX-DapX-M_at
129.20000
A
0.07270
AFFX-DapX-3_at
12.50000
A
0.95351
AFFX-LysX-5_at
12.00000
A
0.65933
AFFX-LysX-M_at
20.10000
A
0.54458
AFFX-LysX-3_at
68.30000
A
0.12357
AFFX-PheX-5_at
9.50000
A
0.90433
AFFX-PheX-M_at
25.30000
A
0.82467
AFFX-PheX-3_at
241.50000
A
0.16586
AFFX-ThrX-5_at
35.60000
A
0.73717
AFFX-ThrX-M_at
10.20000
A
0.79426
22690 702 Kbytes .Supplementary file Size Download File type/resource GSM40086.CEL.gz
3.4 Mb
(ftp) (http) CEL
