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Status
Public on Jan 27, 2006
Title
WT, PR04M001v0
Sample type
RNA
Source name
medial gastrocnemius
Organism
Mus musculus Extracted molecule
total RNA
Description
Medial gastrocnemius removed from 8-month old muscle glycogen synthase WT or overexpressing mouse. RNA was extracted using GibcoBRL TRIzol Reagent and a Quiagen RNeasy kit. Targets were produced using standard Affymetrix procedures from about 5ug of total RNA.
Submission date
Jan 27, 2005
Last update date
May 29, 2005
Contact name
Peter Roach
E-mail(s)
[email protected] Phone
317-274-1583
Organization name
IU School of Medicine
Department
Street address
City
Indianapolis
State/province
IN
ZIP/Postal code
46202
Country
USA
Platform ID
GPL339 Series (1)
GSE2198 Comparison of transcripts from the anterior tibialis, gastrocnemius, and liver of glycogen synthase WT, GSL30 or KO mice
Data table header descriptions ID_REF
VALUE signal, a measure of the abundance of a transcript
ABS_CALL the call in an absolute analysis that indicates if the transcript was present(P), absent(A), marginal(M), or no call(NC)
DETECTION P-VALUE 'detection p-value', p-value that indicates the significance level of the detection call
Data table ID_REF VALUE ABS_CALL DETECTION P-VALUE AFFX-BioB-5_at
1178.80000
P
0.00066
AFFX-BioB-M_at
1368.30000
P
0.00022
AFFX-BioB-3_at
759.40000
P
0.00025
AFFX-BioC-5_at
2307.10000
P
0.00008
AFFX-BioC-3_at
1468.90000
P
0.00006
AFFX-BioDn-5_at
1876.60000
P
0.00005
AFFX-BioDn-3_at
11068.00000
P
0.00012
AFFX-CreX-5_at
19626.80000
P
0.00004
AFFX-CreX-3_at
34342.60000
P
0.00004
AFFX-DapX-5_at
71.00000
A
0.16586
AFFX-DapX-M_at
97.80000
A
0.06767
AFFX-DapX-3_at
15.50000
A
0.74920
AFFX-LysX-5_at
11.10000
A
0.63156
AFFX-LysX-M_at
42.00000
A
0.58862
AFFX-LysX-3_at
11.70000
A
0.48511
AFFX-PheX-5_at
9.30000
A
0.89102
AFFX-PheX-M_at
7.80000
A
0.87642
AFFX-PheX-3_at
164.20000
A
0.18513
AFFX-ThrX-5_at
28.70000
A
0.71225
AFFX-ThrX-M_at
61.40000
A
0.34066
22690 702 Kbytes .Supplementary file Size Download File type/resource GSM40080.CEL.gz
3.4 Mb
(ftp) (http) CEL
