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Status
Public on Jan 27, 2006
Title
MGSKO, PR02M007v0
Sample type
RNA
Source name
Liver
Organism
Mus musculus Extracted molecule
total RNA
Description
Liver removed from 3-month old muscle glycogen synthase WT or knockout mouse. RNA was extracted using GibcoBRL TRIzol Reagent and a Quiagen RNeasy kit. Targets were produced using standard Affymetrix procedures from about 10ug of total RNA.
Submission date
Jan 27, 2005
Last update date
May 29, 2005
Contact name
Peter Roach
E-mail(s)
[email protected] Phone
317-274-1583
Organization name
IU School of Medicine
Department
Street address
City
Indianapolis
State/province
IN
ZIP/Postal code
46202
Country
USA
Platform ID
GPL339 Series (1)
GSE2198 Comparison of transcripts from the anterior tibialis, gastrocnemius, and liver of glycogen synthase WT, GSL30 or KO mice
Data table header descriptions ID_REF
VALUE signal, a measure of the abundance of a transcript
ABS_CALL the call in an absolute analysis that indicates if the transcript was present(P), absent(A), marginal(M), or no call(NC)
DETECTION P-VALUE 'detection p-value', p-value that indicates the significance level of the detection call
Data table ID_REF VALUE ABS_CALL DETECTION P-VALUE AFFX-BioB-5_at
933.20000
P
0.00141
AFFX-BioB-M_at
1205.70000
P
0.00202
AFFX-BioB-3_at
647.30000
P
0.00050
AFFX-BioC-5_at
1936.10000
P
0.00012
AFFX-BioC-3_at
1162.00000
P
0.00004
AFFX-BioDn-5_at
1470.70000
P
0.00009
AFFX-BioDn-3_at
9781.40000
P
0.00011
AFFX-CreX-5_at
13216.10000
P
0.00004
AFFX-CreX-3_at
27000.80000
P
0.00004
AFFX-DapX-5_at
12.90000
A
0.48511
AFFX-DapX-M_at
67.70000
A
0.16586
AFFX-DapX-3_at
13.70000
A
0.92199
AFFX-LysX-5_at
82.00000
A
0.10897
AFFX-LysX-M_at
16.50000
A
0.65933
AFFX-LysX-3_at
11.30000
A
0.68627
AFFX-PheX-5_at
24.60000
A
0.68629
AFFX-PheX-M_at
5.20000
A
0.97809
AFFX-PheX-3_at
156.20000
A
0.34066
AFFX-ThrX-5_at
40.50000
A
0.55935
AFFX-ThrX-M_at
43.30000
A
0.63156
22690 701 Kbytes .Supplementary file Size Download File type/resource GSM40070.CEL.gz
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(ftp) (http) CEL
