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Status
Public on Jan 27, 2006
Title
WT, PR01M001v0
Sample type
RNA
Source name
Anterior tibialis
Organism
Mus musculus Extracted molecule
total RNA
Description
OrganismPart:Muscle;StrainOrLine:C57BL6/129SV; Anterior tibialis removed from 3-month old muscle glycogen synthase WT or knockout mouse. RNA was extracted using GibcoBRL TRIzol Reagent and a Quiagen RNeasy kit. Targets were produced using standard Affymetrix procedures from about 5ug of total RNA.
Submission date
Jan 27, 2005
Last update date
May 29, 2005
Contact name
Peter Roach
E-mail(s)
[email protected] Phone
317-274-1583
Organization name
IU School of Medicine
Department
Street address
City
Indianapolis
State/province
IN
ZIP/Postal code
46202
Country
USA
Platform ID
GPL339 Series (1)
GSE2198 Comparison of transcripts from the anterior tibialis, gastrocnemius, and liver of glycogen synthase WT, GSL30 or KO mice
Data table header descriptions ID_REF
VALUE signal, a measure of the abundance of a transcript
ABS_CALL the call in an absolute analysis that indicates if the transcript was present(P), absent(A), marginal(M), or no call(NC)
DETECTION P-VALUE 'detection p-value', p-value that indicates the significance level of the detection call
Data table ID_REF VALUE ABS_CALL DETECTION P-VALUE AFFX-BioB-5_at
674.70000
P
0.00287
AFFX-BioB-M_at
837.10000
P
0.00017
AFFX-BioB-3_at
307.50000
P
0.00287
AFFX-BioC-5_at
1631.40000
P
0.00017
AFFX-BioC-3_at
1137.00000
P
0.00013
AFFX-BioDn-5_at
1395.80000
P
0.00004
AFFX-BioDn-3_at
9079.80000
P
0.00008
AFFX-CreX-5_at
12626.40000
P
0.00004
AFFX-CreX-3_at
22215.70000
P
0.00004
AFFX-DapX-5_at
17.50000
A
0.60308
AFFX-DapX-M_at
38.80000
A
0.42596
AFFX-DapX-3_at
12.60000
A
0.86864
AFFX-LysX-5_at
8.50000
A
0.76094
AFFX-LysX-M_at
17.30000
A
0.61740
AFFX-LysX-3_at
10.60000
A
0.64555
AFFX-PheX-5_at
5.90000
A
0.97998
AFFX-PheX-M_at
11.30000
A
0.90433
AFFX-PheX-3_at
124.30000
A
0.22764
AFFX-ThrX-5_at
13.20000
A
0.94579
AFFX-ThrX-M_at
11.40000
A
0.78348
22690 701 Kbytes .Supplementary file Size Download File type/resource GSM40057.CEL.gz
3.3 Mb
(ftp) (http) CEL
