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Sample GSM3996855 Query DataSets for GSM3996855
Status Public on Sep 16, 2019
Title Titanium dioxide and estrogen 062619AFE18
Sample type RNA
 
Source name J774 macrophages exposed to titanium dioxide and estrogen
Organism Mus musculus
Characteristics cell line: J774
Treatment protocol Macrophages were plated in 24 well-plate and exposed to 10 µg/well of particles and 2 µg/mL of estrogen for 24 hrs.
Growth protocol Macrophages, murine cell line J774, were maintained in 100-mm Petri dishes in DMEM free of phenol red, supplemented with 10% FBS, 2mM L-glutamine, penicillin (100 U/mL), streptomycin (100 µg/mL) and 10 mM HEPES.
Extracted molecule total RNA
Extraction protocol RNA extraction was conducted through a RNeasy Mini Kit (Qiagen).
Label biotin
Label protocol Standard Affymatrix label protocol
 
Hybridization protocol Standard Affymatrix hybridization protocol
Scan protocol Standard Affymatrix scan protocol
Description Titanium dioxide and estrogen
Data processing RMA Express normalization and background
 
Submission date Aug 01, 2019
Last update date Sep 17, 2019
Contact name Alexey V Fedulov
E-mail(s) [email protected]
Organization name Alpert Medical School of Brown University
Department RIH / Surgical Research
Lab Fedulov Lab
Street address 593 Eddy St.
City Providence
State/province Rhode Island
ZIP/Postal code 02903
Country USA
 
Platform ID GPL18233
Series (1)
GSE135238 The effect of talc on J774 cells

Data table header descriptions
ID_REF
VALUE RMA, natural scale

Data table
ID_REF VALUE
17210851 3.615002
17210853 3.626819
17210854 2.774983
17210857 451.295293
17210858 38.610558
17210859 2029.122415
17210860 691.721669
17210862 1024.233276
17210864 511.810075
17210865 558.250372
17210867 162.443891
17210868 429.746035
17210870 13.906122
17210871 2844.847545
17210872 57.796996
17210873 10.488987
17210874 1262.574796
17210876 666.41941
17210877 1214.731214
17210878 487.221669

Total number of rows: 269751

Table truncated, full table size 5039 Kbytes.




Supplementary file Size Download File type/resource
GSM3996855_062619AFE18.CEL.gz 8.5 Mb (ftp)(http) CEL
Processed data included within Sample table

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