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Sample GSM389974 Query DataSets for GSM389974
Status Public on Feb 28, 2010
Title X4320028039_D
Sample type RNA
 
Source name PAXgene stabilized blood
Organism Homo sapiens
Characteristics cell type: PBMC
Growth protocol Peripheral blood samples
Extracted molecule total RNA
Extraction protocol RNA was extracted with Trizol reagent, followed by clean-up and DNase I treatment with QIAGEN RNeasy mini kit in accordance with the prescribed protocol provided with the kit. Quality control was performed with NanoDrop ThermoScientific.
Label biotin
Label protocol Biotinylated cRNA were prepared with the Ambion MessageAmp kit for Illumina arrays
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description Bronchial Carcinoma
Data processing The data were normalised using quantile normalisation in R
 
Submission date Apr 07, 2009
Last update date Oct 23, 2009
Contact name Thomas Zander
Organization name University Hospital Cologne
Street address Kerpenerstr. 62
City Cologne
ZIP/Postal code 50924
Country Germany
 
Platform ID GPL6102
Series (1)
GSE12771 Lung cancer prediction

Data table header descriptions
ID_REF
VALUE quantile normalized

Data table
ID_REF VALUE
ILMN_1809034 53.55920434
ILMN_1660305 57.27340597
ILMN_1792173 77.38050633
ILMN_1762337 40.73106102
ILMN_1736007 44.90446561
ILMN_1787689 55.35105867
ILMN_1731507 40.05035046
ILMN_1814316 44.57630087
ILMN_1745607 46.62869112
ILMN_1757454 58.90021158
ILMN_1668111 72.68079179
ILMN_1735045 43.93801413
ILMN_1680754 49.43201612
ILMN_1659452 43.88781577
ILMN_1767388 73.9062426
ILMN_1673870 42.25590903
ILMN_1675204 49.59240286
ILMN_1755321 54.75070628
ILMN_1698554 64.80163148
ILMN_1814092 45.72307367

Total number of rows: 48701

Table truncated, full table size 1183 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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