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Sample GSM3610966 Query DataSets for GSM3610966
Status Public on Feb 14, 2020
Title Young PDGFRa+ mesenchymal progenitors
Sample type RNA
 
Source name PDGFRa+ cells from young hind limb, freshly sorted
Organism Mus musculus
Characteristics strain/background: C57BL/6
age: Young (8-10 wk)
cell type: PDGFRa+ mesenchymal progenitors
Extracted molecule total RNA
Extraction protocol RNA samples were extracted from cells using RNeasy micro kit (Qiagen).
Label Cy5
Label protocol Amino Allyl aRNA was synthesized by Amino Allyl MessageAmp II aRNA Amplification Kit (Ambion #1753). CyeDye Coupling and fragmentation were performed as the protocol supplied by TORAY Industries, Inc.
 
Hybridization protocol Hybridized for 16 h at 37 C with rotary shaking (250 rpm). Hybridization buffer and washing protocol were followed by the protocol supplied by TORAY Industries, Inc.
Scan protocol 3D-Gene Scanner (Toray Industries Inc., Tokyo, Japan) was used for scanning. Images were quantified using Extraction (Toray Industries Inc., Tokyo, Japan).
Description Y Pα
Data processing The raw data of each spot was normalized by substitution with a mean intensity of the background signal determined by all blank spots’ signal intensities of 95% confidence intervals.
 
Submission date Feb 16, 2019
Last update date Feb 15, 2020
Contact name Satoshi Kondo
Organization name Toray Industries,Inc.
Street address 10-1 tebiro 6-chome
City Kamakura
State/province Kanagawa
ZIP/Postal code 248-8555
Country Japan
 
Platform ID GPL22438
Series (2)
GSE126665 Gene expression analysis of cell populations derived from skeletal muscle of young and aged mice
GSE126667 Gene expression analysis of skeletal muscle

Data table header descriptions
ID_REF
VALUE Normalized signal intensity

Data table
ID_REF VALUE
M200005345 393.4
M200005179 109.7
M200005157 331.1
M200005020 255.8
M200004998 11.3
M200002815 47.5
M200002791 2123.6
M200002643 67.9
M200002616 13.1
M200002468 98.3
M200002447 63.3
M200002306 4.5
M200002281 7.4
M200003325 210.9
M200003141 115.1
M200003123 180.6
M200002976 391.9
M200002960 8.4
M200000665 19.3
M200000650 36.9

Total number of rows: 23473

Table truncated, full table size 359 Kbytes.




Supplementary file Size Download File type/resource
GSM3610966_QM4YR16.txt.gz 490.0 Kb (ftp)(http) TXT
Processed data included within Sample table

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