GEO Accession viewer

NCBI > GEO > Accession Display

Not logged in | Login

GEO help: Mouse over screen elements for information.

Sample GSM35528

Query DataSets for GSM35528

Status

Public on Dec 01, 2004

Title

Patient 43, Visit 3, Time of treatment 16 weeks, File nt100407

Sample type

RNA

Source name

Peripheral Blood Mononuclear Cells (PBMC)

Organism

Homo sapiens

Extracted molecule

total RNA

Description

PBMCs from Renal Cell Carcinoma subjects. Samples collected over time as subject was treated with CCI-779
Donor number : 43
Donor disease : Renal Cell Carcinoma
Visit number : 3
Treatment : CCI-779
Time of treatment : 16 weeks
CCI Cummulative AUC : 17236
Cummulative AUC sum : 78448

Submission date

Nov 18, 2004

Last update date

Mar 16, 2009

Contact name

Michael E. Burczynski

E-mail(s)

[email protected]

Phone

484-865-2656

Fax

484-865-9401

Organization name

Wyeth

Department

Pharmacogenomic Biomarkers

Lab

Biomarker Lab

Street address

500 Arcola Road

City

Collegeville

State/province

ZIP/Postal code

19426

Country

USA

Platform ID

GPL8300

Series (1)

GSE1982

PBMCs from CCI-779 Treated RCC subjects

Data table header descriptions
ID_REF
VALUE	Affymetrix MAS4 Average Difference Value normalized to a target value of 100
CALL	Affymetrix MAS4 Absolute call

Data table
ID_REF	VALUE	CALL
AFFX-hum_alu_at	9181.092773	P
AFFX-YEL024w/RIP1_at	8.68	A
AFFX-YEL021w/URA3_at	40.547001	A
AFFX-YEL018w/_at	-4.027	A
AFFX-YEL002c/WBP1_at	2.701	A
AFFX-TrpnX-M_at	-35.09	A
AFFX-TrpnX-5_at	-7.367	A
AFFX-TrpnX-3_at	-8.07	A
AFFX-ThrX-M_at	2.506	A
AFFX-ThrX-5_at	-4.674	A
AFFX-ThrX-3_at	-41.193001	A
AFFX-PheX-M_at	-17.334999	A
AFFX-PheX-5_at	-21.823	A
AFFX-PheX-3_at	5.292	A
AFFX-MurIL4_at	12.635	A
AFFX-MurIL2_at	-29.379	A
AFFX-MurIL10_at	-7.968	A
AFFX-MurFAS_at	28.132	A
AFFX-M27830_M_at	479.35199	A
AFFX-M27830_5_at	150.399002	P

Total number of rows: 12625

Table truncated, full table size 248 Kbytes.

Supplementary data files not provided