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Sample GSM34750

Query DataSets for GSM34750

Status

Public on Nov 09, 2004

Title

430A (LGG treatment) 7-24-03

Sample type

RNA

Source name

Mouse colon epithelial cells

Organism

Mus musculus

Extracted molecule

total RNA

Description

Sample was obtained from LGG treatment (YAMC cells treated with Lactobacillus GG condition media for 16h). RNA was extracted with Trizol and purified with Qiagen kit and was profiled for detection of gene expression after treatment with Lactobacillus GG condition media for 16h.

Submission date

Nov 08, 2004

Last update date

May 27, 2005

Contact name

Julia Tao

E-mail(s)

[email protected]

Phone

773-702-2283

Organization name

University of Chicago

Department

Medicine

Lab

Gastorenterology

Street address

5841 south maryland

City

Chicago

State/province

ZIP/Postal code

60637

Country

USA

Platform ID

GPL339

Series (1)

GSE1940

LGG treatment on YANC

Data table header descriptions
ID_REF
VALUE	LGG treatment signal
ABS_CALL	absent/present/missing
DETECTION P-VALUE	LGG treatment signal p-value

Data table
ID_REF	VALUE	ABS_CALL	DETECTION P-VALUE
AFFX-BioB-5_at	204.9	P	0.004017
AFFX-BioB-M_at	310	P	0.000297
AFFX-BioB-3_at	128.3	P	0.003212
AFFX-BioC-5_at	472.5	P	0.000195
AFFX-BioC-3_at	400	P	0.00007
AFFX-BioDn-5_at	413.5	P	0.000052
AFFX-BioDn-3_at	2548.4	P	0.000081
AFFX-CreX-5_at	5089	P	0.000044
AFFX-CreX-3_at	8532.7	P	0.000044
AFFX-DapX-5_at	19.4	A	0.275146
AFFX-DapX-M_at	20.1	A	0.382599
AFFX-DapX-3_at	18.2	A	0.749204
AFFX-LysX-5_at	2.4	A	0.897835
AFFX-LysX-M_at	23.2	A	0.645547
AFFX-LysX-3_at	13.3	A	0.340661
AFFX-PheX-5_at	2.9	A	0.957038
AFFX-PheX-M_at	4.3	A	0.860518
AFFX-PheX-3_at	43.2	A	0.205732
AFFX-ThrX-5_at	5.9	A	0.824672
AFFX-ThrX-M_at	9.4	A	0.617401

Total number of rows: 16383

Table truncated, full table size 447 Kbytes.

Supplementary data files not provided