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Sample GSM3325768 Query DataSets for GSM3325768
Status Public on Jan 01, 2019
Title H_Control-4: Primary hepatocyte, control, rep4
Sample type RNA
 
Source name Primary hepatocyte, control
Organism Mus musculus
Characteristics tissue: Primary hepatocyte
Treatment protocol Primary hepatocytes were treated with 0.1% DMSO (control) or 200 nM FK866 (NAMPT inhibitor) for 48 hours. Primary islets were treated with 0.1% DMSO or 10 nM FK866 for 48 hours.
Growth protocol Primary hepatocyte or pancreatic islets were isolated from wild type B6 mice and cultured.
Extracted molecule total RNA
Extraction protocol Total RNA was isolated from primary hepatocytes and pacreatic islets treated with DMSO or FK866 using Rneasy Mini Kit (Qiagen).
Label Biotin
Label protocol Biotinylated cRNA were prepared for Illumina arrays
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description replicate 4
Data processing The background-subtracted raw microarray data were also normalized by Z score transformation to obtain Z ratios. All data were analyzed by the R statistical software package.
 
Submission date Aug 09, 2018
Last update date Sep 15, 2023
Contact name Jun Yoshino
E-mail(s) [email protected]
Organization name Faculty of Medicine, Shimane University
Street address 89-1 Enya-cho
City Izumo
State/province Shimane
ZIP/Postal code 693-8501
Country Japan
 
Platform ID GPL15097
Series (1)
GSE118365 Slc12a8 is a nicotinamide mononucleotide transporter that counteracts aging

Data table header descriptions
ID_REF
VALUE Z scores/ratios were obtained with Z score transformation. Z socres are shown in the matrix data.

Data table
ID_REF VALUE
Zzz3 -0.246717498
Zzef1 -1.172187362
Zyx 2.131377635
Zyg11b -1.172187362
Zxdc 0.461633751
Zxda 0.494478075
Zwilch -0.047884612
Zw10 0.616048405
Zufsp -1.172187362
Zswim5 0.557383738
Zswim4 1.243460472
Zswim3 0.603163318
Zswim2 -0.441207709
Zswim1 0.814884995
Zscan5b -1.172187362
Zscan4c -0.744417286
Zscan21 0.682401859
Zscan20 -0.528501093
Zscan2 -0.664230967
Zscan12 1.214957434

Total number of rows: 18111

Table truncated, full table size 349 Kbytes.




Supplementary data files not provided
Processed data included within Sample table
Processed data are available on Series record

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