|
| Status |
Public on Nov 07, 2018 |
| Title |
MS0678_Coffin-Siris Syndrome 1 |
| Sample type |
genomic |
| |
|
| Source name |
MS0678
|
| Organism |
Homo sapiens |
| Characteristics |
disease state: Coffin-Siris syndrome
tissue: Whole Blood
|
| Treatment protocol |
N/A
|
| Growth protocol |
N/A
|
| Extracted molecule |
genomic DNA |
| Extraction protocol |
Standard DNA extraction from blood
|
| Label |
Cy5 and Cy3
|
| Label protocol |
According to the manufacturer's protocol
|
| |
|
| Hybridization protocol |
According to the manufacturer's protocol
|
| Scan protocol |
iScan
|
| Description |
SAMPLE 3
|
| Data processing |
Illumina Normalization method with background correction, using minfi package in R 3.4.2
|
| |
|
| Submission date |
Jul 12, 2018 |
| Last update date |
Nov 07, 2018 |
| Contact name |
Bekim Sadikovic |
| E-mail(s) |
[email protected]
|
| Organization name |
University of Western Ontario
|
| Department |
Pathology and Laboratory Medicine
|
| Street address |
800 Commissioners Rd E
|
| City |
London |
| State/province |
Ontario |
| ZIP/Postal code |
N6A 5W9 |
| Country |
Canada |
| |
|
| Platform ID |
GPL13534 |
| Series (1) |
| GSE116992 |
Genome-wide DNA methylation analysis of the whole blood of individuals with Coffin-Siris and Nicolaides-Baraitser syndromes |
|
