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Sample GSM326190 Query DataSets for GSM326190
Status Public on Jul 01, 2009
Title R006
Sample type RNA
 
Source name Whole blood from patient who had recovered from melioidosis
Organism Homo sapiens
Characteristics Age: 41
Gender: M
Ethnicity: Not Hispanic or Latino
Race: Asian
Illness: Control/Recovery
Treatment: N/A
Pathogen: N/A
Extracted molecule total RNA
Extraction protocol Tempus Spin Isolation Kit
Label biotin
Label protocol Biotinylated cRNA were generated following manufacturer protocols using the Illumina TotalPrep Amplification Kit from Ambion
 
Hybridization protocol Hybridize 6-Sample Beadchip
Scan protocol SentrixScanVersion 2.3.0.13 (This information is in the .XML file)
Description The subject had recovered from melioidosis
Data processing The data were analysed using BeadStudio version 1.5.1.3 using the average chip normalization method.
 
Submission date Oct 02, 2008
Last update date May 29, 2009
Contact name Damien Chaussabel
E-mail(s) [email protected]
Organization name Baylor Institute for Immunology Research
Street address 3434 Live Oak
City Dallas
State/province TX
ZIP/Postal code 75204
Country USA
 
Platform ID GPL6106
Series (1)
GSE13015 Genomic Transcriptional Profiling Identifies a Blood Biomarker Signature for the Diagnosis of Septicemic Melioidosis

Data table header descriptions
ID_REF Illumina probe set identifier
VALUE Illumina-calculated Signal intensity
Detection Illumina detection call

Data table
ID_REF VALUE Detection
6960451 75.87276 0.001455604
2850504 -3.787201 0.5902475
7560397 17.7203 0.07787482
5360747 -1.299882 0.4978166
2600731 1128.829 0
3990110 -16.4921 0.930131
2120309 -19.74653 0.9650655
6420474 59.43781 0.001455604
670095 -17.53046 0.9439592
130367 -2.103839 0.5283843
3830242 -19.98418 0.9679767
6480041 -7.512101 0.731441
7510608 1.92567 0.3966521
1570494 2.940641 0.363901
1740092 30.18852 0.01382824
3440520 1.534987 0.4082969
6520451 14.12158 0.1215429
780746 -5.696934 0.6710335
150546 2.010181 0.3944687
2640192 -10.22757 0.8187773

Total number of rows: 48687

Table truncated, full table size 1241 Kbytes.




Supplementary file Size Download File type/resource
GSM326190_R006.xls.gz 3.1 Mb (ftp)(http) XLS
Processed data included within Sample table

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