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Sample GSM326189 Query DataSets for GSM326189
Status Public on Jul 01, 2009
Title DM006
Sample type RNA
 
Source name Whole blood from non-infected patient with type 2 diabetes
Organism Homo sapiens
Characteristics Age: 48
Gender: F
Ethnicity: Not Hispanic or Latino
Race: Asian
Illness: Control/type 2 diabetes
Treatment: N/A
Pathogen: N/A
Extracted molecule total RNA
Extraction protocol Tempus Spin Isolation Kit
Label biotin
Label protocol Biotinylated cRNA were generated following manufacturer protocols using the Illumina TotalPrep Amplification Kit from Ambion
 
Hybridization protocol Hybridize 6-Sample Beadchip
Scan protocol SentrixScanVersion 2.3.0.13 (This information is in the .XML file)
Description The subject diagnosted type 2 diabetes
Data processing The data were analysed using BeadStudio version 1.5.1.3 using the average chip normalization method.
 
Submission date Oct 02, 2008
Last update date May 29, 2009
Contact name Damien Chaussabel
E-mail(s) [email protected]
Organization name Baylor Institute for Immunology Research
Street address 3434 Live Oak
City Dallas
State/province TX
ZIP/Postal code 75204
Country USA
 
Platform ID GPL6106
Series (1)
GSE13015 Genomic Transcriptional Profiling Identifies a Blood Biomarker Signature for the Diagnosis of Septicemic Melioidosis

Data table header descriptions
ID_REF Illumina probe set identifier
VALUE Illumina-calculated Signal intensity
Detection Illumina detection call

Data table
ID_REF VALUE Detection
6960451 41.17316 0.004366812
2850504 -6.313735 0.7605531
7560397 -6.671153 0.7758369
5360747 -8.421967 0.8362445
2600731 980.169 0
3990110 -9.555957 0.86754
2120309 -14.34533 0.9599709
6420474 52.23042 0.002183406
670095 -13.43731 0.9497817
130367 15.07523 0.04657933
3830242 -11.35457 0.9141194
6480041 1.497664 0.3857351
7510608 27.97572 0.006550218
1570494 -0.245813 0.4687045
1740092 -2.643556 0.5924308
3440520 -5.098621 0.7110626
6520451 18.82893 0.02474527
780746 13.30351 0.07350801
150546 -4.987911 0.705968
2640192 -5.426202 0.727802

Total number of rows: 48687

Table truncated, full table size 1237 Kbytes.




Supplementary file Size Download File type/resource
GSM326189_DM006.xls.gz 3.1 Mb (ftp)(http) XLS
Processed data included within Sample table

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