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Sample GSM326188 Query DataSets for GSM326188
Status Public on Jul 01, 2009
Title R005
Sample type RNA
 
Source name Whole blood from patient who had recovered from melioidosis
Organism Homo sapiens
Characteristics Age: 56
Gender: M
Ethnicity: Not Hispanic or Latino
Race: Asian
Illness: Control/Recovery
Treatment: N/A
Pathogen: N/A
Extracted molecule total RNA
Extraction protocol Tempus Spin Isolation Kit
Label biotin
Label protocol Biotinylated cRNA were generated following manufacturer protocols using the Illumina TotalPrep Amplification Kit from Ambion
 
Hybridization protocol Hybridize 6-Sample Beadchip
Scan protocol SentrixScanVersion 2.3.0.13 (This information is in the .XML file)
Description The subject had recovered from melioidosis
Data processing The data were analysed using BeadStudio version 1.5.1.3 using the average chip normalization method.
 
Submission date Oct 02, 2008
Last update date May 29, 2009
Contact name Damien Chaussabel
E-mail(s) [email protected]
Organization name Baylor Institute for Immunology Research
Street address 3434 Live Oak
City Dallas
State/province TX
ZIP/Postal code 75204
Country USA
 
Platform ID GPL6106
Series (1)
GSE13015 Genomic Transcriptional Profiling Identifies a Blood Biomarker Signature for the Diagnosis of Septicemic Melioidosis

Data table header descriptions
ID_REF Illumina probe set identifier
VALUE Illumina-calculated Signal intensity
Detection Illumina detection call

Data table
ID_REF VALUE Detection
6960451 55.5963 0.000727802
2850504 -1.578895 0.5611354
7560397 -7.143323 0.8617176
5360747 -0.4167415 0.4970888
2600731 898.4396 0
3990110 0.7908204 0.4352256
2120309 -7.726079 0.8755459
6420474 23.50485 0.005094614
670095 -1.317207 0.5487627
130367 -2.102739 0.5909752
3830242 -6.179433 0.8275109
6480041 8.980403 0.08369724
7510608 14.00883 0.02620087
1570494 9.423657 0.0713246
1740092 4.228618 0.2518195
3440520 -6.561358 0.8442504
6520451 18.89472 0.008733625
780746 -2.655641 0.628821
150546 -0.2692048 0.4898108
2640192 -10.93346 0.9556041

Total number of rows: 48687

Table truncated, full table size 1233 Kbytes.




Supplementary file Size Download File type/resource
GSM326188_R005.xls.gz 3.1 Mb (ftp)(http) XLS
Processed data included within Sample table

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