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Sample GSM326187 Query DataSets for GSM326187
Status Public on Jul 01, 2009
Title DM005
Sample type RNA
 
Source name Whole blood from non-infected patient with type 2 diabetes
Organism Homo sapiens
Characteristics Age: 41
Gender: F
Ethnicity: Not Hispanic or Latino
Race: Asian
Illness: Control/type 2 diabetes
Treatment: N/A
Pathogen: N/A
Extracted molecule total RNA
Extraction protocol Tempus Spin Isolation Kit
Label biotin
Label protocol Biotinylated cRNA were generated following manufacturer protocols using the Illumina TotalPrep Amplification Kit from Ambion
 
Hybridization protocol Hybridize 6-Sample Beadchip
Scan protocol SentrixScanVersion 2.3.0.13 (This information is in the .XML file)
Description The subject diagnosted type 2 diabetes
Data processing The data were analysed using BeadStudio version 1.5.1.3 using the average chip normalization method.
 
Submission date Oct 02, 2008
Last update date May 29, 2009
Contact name Damien Chaussabel
E-mail(s) [email protected]
Organization name Baylor Institute for Immunology Research
Street address 3434 Live Oak
City Dallas
State/province TX
ZIP/Postal code 75204
Country USA
 
Platform ID GPL6106
Series (1)
GSE13015 Genomic Transcriptional Profiling Identifies a Blood Biomarker Signature for the Diagnosis of Septicemic Melioidosis

Data table header descriptions
ID_REF Illumina probe set identifier
VALUE Illumina-calculated Signal intensity
Detection Illumina detection call

Data table
ID_REF VALUE Detection
6960451 74.38151 0.000727802
2850504 -11.13178 0.9250364
7560397 -11.3517 0.9315866
5360747 -7.308765 0.8224163
2600731 891.4509 0
3990110 -1.142902 0.5356623
2120309 -10.04516 0.9002911
6420474 19.7798 0.01601164
670095 -14.2247 0.9745269
130367 -0.3538384 0.4883552
3830242 -8.717318 0.8682678
6480041 3.865331 0.290393
7510608 24.76889 0.005094614
1570494 12.23993 0.07569141
1740092 12.41009 0.07350801
3440520 -7.189145 0.8158661
6520451 6.192568 0.1935953
780746 -0.5935416 0.503639
150546 11.79409 0.08005822
2640192 -8.87849 0.8719068

Total number of rows: 48687

Table truncated, full table size 1241 Kbytes.




Supplementary file Size Download File type/resource
GSM326187_DM005.xls.gz 3.1 Mb (ftp)(http) XLS
Processed data included within Sample table

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