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Sample GSM326183 Query DataSets for GSM326183
Status Public on Jul 01, 2009
Title R004
Sample type RNA
 
Source name Whole blood from patient who had recovered from melioidosis
Organism Homo sapiens
Characteristics Age: 48
Gender: M
Ethnicity: Not Hispanic or Latino
Race: Asian
Illness: Control/Recovery
Treatment: N/A
Pathogen: N/A
Extracted molecule total RNA
Extraction protocol Tempus Spin Isolation Kit
Label biotin
Label protocol Biotinylated cRNA were generated following manufacturer protocols using the Illumina TotalPrep Amplification Kit from Ambion
 
Hybridization protocol Hybridize 6-Sample Beadchip
Scan protocol SentrixScanVersion 2.3.0.13 (This information is in the .XML file)
Description The subject had recovered from melioidosis
Data processing The data were analysed using BeadStudio version 1.5.1.3 using the average chip normalization method.
 
Submission date Oct 02, 2008
Last update date May 29, 2009
Contact name Damien Chaussabel
E-mail(s) [email protected]
Organization name Baylor Institute for Immunology Research
Street address 3434 Live Oak
City Dallas
State/province TX
ZIP/Postal code 75204
Country USA
 
Platform ID GPL6106
Series (1)
GSE13015 Genomic Transcriptional Profiling Identifies a Blood Biomarker Signature for the Diagnosis of Septicemic Melioidosis

Data table header descriptions
ID_REF Illumina probe set identifier
VALUE Illumina-calculated Signal intensity
Detection Illumina detection call

Data table
ID_REF VALUE Detection
6960451 67.09081 0.001455604
2850504 -9.822371 0.9483261
7560397 9.0516 0.1018923
5360747 -0.7242652 0.4970888
2600731 891.7672 0
3990110 1.287086 0.3770015
2120309 -16.03787 0.996361
6420474 49.7436 0.002183406
670095 -13.48862 0.9934498
130367 13.5608 0.0356623
3830242 -7.516223 0.8719068
6480041 1.624588 0.3580786
7510608 20.56361 0.008733625
1570494 10.08153 0.08005822
1740092 5.261201 0.1885007
3440520 3.101455 0.2838428
6520451 6.046216 0.1659389
780746 -0.3342379 0.4737991
150546 -2.097477 0.5764192
2640192 -2.214561 0.5858806

Total number of rows: 48687

Table truncated, full table size 1248 Kbytes.




Supplementary file Size Download File type/resource
GSM326183_R004.xls.gz 3.1 Mb (ftp)(http) XLS
Processed data included within Sample table

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