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Sample GSM326174 Query DataSets for GSM326174
Status Public on Jul 01, 2009
Title R003
Sample type RNA
 
Source name Whole blood from patient who had recovered from melioidosis
Organism Homo sapiens
Characteristics Age: 42
Gender: F
Ethnicity: Not Hispanic or Latino
Race: Asian
Illness: Control/Recovery
Treatment: N/A
Pathogen: N/A
Extracted molecule total RNA
Extraction protocol Tempus Spin Isolation Kit
Label biotin
Label protocol Biotinylated cRNA were generated following manufacturer protocols using the Illumina TotalPrep Amplification Kit from Ambion
 
Hybridization protocol Hybridize 6-Sample Beadchip
Scan protocol SentrixScanVersion 2.3.0.13 (This information is in the .XML file)
Description The subject had recovered from melioidosis
Data processing The data were analysed using BeadStudio version 1.5.1.3 using the average chip normalization method.
 
Submission date Oct 02, 2008
Last update date May 29, 2009
Contact name Damien Chaussabel
E-mail(s) [email protected]
Organization name Baylor Institute for Immunology Research
Street address 3434 Live Oak
City Dallas
State/province TX
ZIP/Postal code 75204
Country USA
 
Platform ID GPL6106
Series (1)
GSE13015 Genomic Transcriptional Profiling Identifies a Blood Biomarker Signature for the Diagnosis of Septicemic Melioidosis

Data table header descriptions
ID_REF Illumina probe set identifier
VALUE Illumina-calculated Signal intensity
Detection Illumina detection call

Data table
ID_REF VALUE Detection
6960451 77.01233 0.001455604
2850504 -6.888206 0.8129549
7560397 -3.728497 0.6834061
5360747 -6.176307 0.7809316
2600731 1052.837 0
3990110 -3.117567 0.6513828
2120309 -17.63777 0.9941776
6420474 40.83281 0.001455604
670095 -10.54125 0.919214
130367 -7.860493 0.8508006
3830242 -6.001228 0.7765648
6480041 8.158669 0.1346434
7510608 22.35127 0.00727802
1570494 11.99595 0.05822416
1740092 8.226527 0.1331878
3440520 -10.68857 0.9235808
6520451 8.891937 0.1164483
780746 -2.454624 0.6157205
150546 11.80413 0.05967977
2640192 -5.015551 0.7423581

Total number of rows: 48687

Table truncated, full table size 1239 Kbytes.




Supplementary file Size Download File type/resource
GSM326174_R003.xls.gz 3.1 Mb (ftp)(http) XLS
Processed data included within Sample table

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