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Sample GSM326165 Query DataSets for GSM326165
Status Public on Jul 01, 2009
Title R001
Sample type RNA
 
Source name Whole blood from patient who had recovered from melioidosis
Organism Homo sapiens
Characteristics Age: 41
Gender: F
Ethnicity: Not Hispanic or Latino
Race: Asian
Illness: Control/Recovery
Treatment: N/A
Pathogen: N/A
Extracted molecule total RNA
Extraction protocol Tempus Spin Isolation Kit
Label biotin
Label protocol Biotinylated cRNA were generated following manufacturer protocols using the Illumina TotalPrep Amplification Kit from Ambion
 
Hybridization protocol Hybridize 6-Sample Beadchip
Scan protocol SentrixScanVersion 2.3.0.13 (This information is in the .XML file)
Description The subject had recovered from melioidosis
Data processing The data were analysed using BeadStudio version 1.5.1.3 using the average chip normalization method.
 
Submission date Oct 02, 2008
Last update date May 29, 2009
Contact name Damien Chaussabel
E-mail(s) [email protected]
Organization name Baylor Institute for Immunology Research
Street address 3434 Live Oak
City Dallas
State/province TX
ZIP/Postal code 75204
Country USA
 
Platform ID GPL6106
Series (1)
GSE13015 Genomic Transcriptional Profiling Identifies a Blood Biomarker Signature for the Diagnosis of Septicemic Melioidosis

Data table header descriptions
ID_REF Illumina probe set identifier
VALUE Illumina-calculated Signal intensity
Detection Illumina detection call

Data table
ID_REF VALUE Detection
6960451 67.56929 0.001455604
2850504 -17.80481 0.9534207
7560397 2.749741 0.3806405
5360747 -20.72397 0.9745269
2600731 660.5605 0
3990110 3.867429 0.3420669
2120309 -7.749239 0.7510917
6420474 38.72804 0.005094614
670095 -9.951103 0.8013101
130367 4.356052 0.3231441
3830242 -10.85627 0.8224163
6480041 -2.589252 0.5655022
7510608 10.34765 0.1673945
1570494 12.52438 0.1368268
1740092 -12.62194 0.8595342
3440520 -10.84723 0.8224163
6520451 5.787521 0.2765648
780746 -0.5514482 0.4970888
150546 -5.578009 0.6768559
2640192 -27.80969 0.9934498

Total number of rows: 48687

Table truncated, full table size 1267 Kbytes.




Supplementary file Size Download File type/resource
GSM326165_R001.xls.gz 3.1 Mb (ftp)(http) XLS
Processed data included within Sample table

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