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Sample GSM326109 Query DataSets for GSM326109
Status Public on Jul 01, 2009
Title R010
Sample type RNA
 
Source name Whole blood from patient who had recovered from melioidosis
Organism Homo sapiens
Characteristics Age: 64
Gender: M
Ethnicity: Not Hispanic or Latino
Race: Asian
Illness: Control/Recovery
Treatment: N/A
Pathogen: N/A
Extracted molecule total RNA
Extraction protocol Tempus Spin Isolation Kit
Label biotin
Label protocol Biotinylated cRNA were generated following manufacturer protocols using the Illumina TotalPrep Amplification Kit from Ambion
 
Hybridization protocol Hybridize 6-Sample Beadchip
Scan protocol SentrixScanVersion 2.3.0.13 (This information is in the .XML file)
Description Control/Recovery
Data processing The data were analysed using BeadStudio version 1.5.1.3 using the average chip normalization method.
 
Submission date Oct 02, 2008
Last update date May 29, 2009
Contact name Damien Chaussabel
E-mail(s) [email protected]
Organization name Baylor Institute for Immunology Research
Street address 3434 Live Oak
City Dallas
State/province TX
ZIP/Postal code 75204
Country USA
 
Platform ID GPL6106
Series (1)
GSE13015 Genomic Transcriptional Profiling Identifies a Blood Biomarker Signature for the Diagnosis of Septicemic Melioidosis

Data table header descriptions
ID_REF Illumina probe set identifier
VALUE Illumina-calculated Signal intensity
Detection Illumina detection call

Data table
ID_REF VALUE Detection
6960451 28.32036 0
2850504 -0.1703195 0.4962908
7560397 2.576935 0.1906528
5360747 3.480686 0.1224036
2600731 719.3371 0
3990110 7.365556 0.01186944
2120309 -4.627379 0.9547478
6420474 18.77164 0
670095 -1.917556 0.7299703
130367 -2.218128 0.7655786
3830242 -0.6802244 0.5682493
6480041 0.7020978 0.3746291
7510608 12.85213 0
1570494 7.99263 0.003709199
1740092 0.6891872 0.3775964
3440520 0.270575 0.4406528
6520451 9.260805 0
780746 6.305646 0.03338279
150546 -2.444315 0.7885756
2640192 0.302872 0.4376855

Total number of rows: 48687

Table truncated, full table size 1184 Kbytes.




Supplementary file Size Download File type/resource
GSM326109_R010.xls.gz 3.0 Mb (ftp)(http) XLS
Processed data included within Sample table

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