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Sample GSM326094 Query DataSets for GSM326094
Status Public on Jul 01, 2009
Title R007
Sample type RNA
 
Source name Whole blood from patient who had recovered from melioidosis
Organism Homo sapiens
Characteristics Age: 55
Gender: F
Ethnicity: Not Hispanic or Latino
Race: Asian
Illness: Control/Recovery
Treatment: N/A
Pathogen: N/A
Extracted molecule total RNA
Extraction protocol Tempus Spin Isolation Kit
Label biotin
Label protocol Biotinylated cRNA were generated following manufacturer protocols using the Illumina TotalPrep Amplification Kit from Ambion
 
Hybridization protocol Hybridize 6-Sample Beadchip
Scan protocol SentrixScanVersion 2.3.0.13 (This information is in the .XML file)
Description The subject had recovered from melioidosis
Data processing The data were analysed using BeadStudio version 1.5.1.3 using the average chip normalization method.
 
Submission date Oct 02, 2008
Last update date May 29, 2009
Contact name Damien Chaussabel
E-mail(s) [email protected]
Organization name Baylor Institute for Immunology Research
Street address 3434 Live Oak
City Dallas
State/province TX
ZIP/Postal code 75204
Country USA
 
Platform ID GPL6106
Series (1)
GSE13015 Genomic Transcriptional Profiling Identifies a Blood Biomarker Signature for the Diagnosis of Septicemic Melioidosis

Data table header descriptions
ID_REF Illumina probe set identifier
VALUE Illumina-calculated Signal intensity
Detection Illumina detection call

Data table
ID_REF VALUE Detection
6960451 38.45721 0
2850504 -0.5920221 0.5369822
7560397 1.928569 0.2928994
5360747 -4.502294 0.9053255
2600731 988.7027 0
3990110 2.967437 0.2056213
2120309 -5.436245 0.943787
6420474 17.85913 0
670095 2.109084 0.2751479
130367 -1.547273 0.6360947
3830242 -4.472635 0.9016272
6480041 -0.03866273 0.4844674
7510608 18.32816 0
1570494 7.746562 0.02736686
1740092 6.763001 0.04215976
3440520 4.371951 0.1242604
6520451 5.925757 0.06360947
780746 7.154947 0.03846154
150546 -1.138921 0.5968935
2640192 1.746444 0.306213

Total number of rows: 48687

Table truncated, full table size 1192 Kbytes.




Supplementary file Size Download File type/resource
GSM326094_R007.xls.gz 3.0 Mb (ftp)(http) XLS
Processed data included within Sample table

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