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Sample GSM3152238 Query DataSets for GSM3152238
Status Public on Jul 16, 2019
Title AML patient#100
Sample type RNA
 
Source name AML patient
Organism Homo sapiens
Characteristics subject status: acute myeloid leukemia (AML)
subject id: AML patient#100
tissue: bone marrow
cell type: mononucleated cells
Treatment protocol not applicable
Growth protocol Mononucleated cells from the bone marrow samples of the AML patients and the healthy controls
Extracted molecule total RNA
Extraction protocol TRIzol
Label biotin
Label protocol According to the protocols of Affymetrix Gene Expression Service Lab, Academia Sinica, Taiwan
 
Hybridization protocol According to the protocols of Affymetrix Gene Expression Service Lab, Academia Sinica, Taiwan
Scan protocol According to the protocols of Affymetrix Gene Expression Service Lab, Academia Sinica, Taiwan
Description AML2018
Data processing Data were processed using Expression Console software with RMA normalization.
probe group file: HTA-2_0.r3.pgf
meta-probeset file: HTA-2_0.r3.Psrs.mps
 
Submission date May 24, 2018
Last update date Jul 16, 2019
Contact name Huai-Hsuan Huang
E-mail(s) [email protected]
Organization name National Taiwan University Hospital
Department Internal Medicine
Street address No.7, Chong-Shan South Road, Zhongzheng Dist.
City Taipei City
State/province Taiwan
ZIP/Postal code 100
Country Taiwan
 
Platform ID GPL17586
Series (1)
GSE114868 Long non-coding RNA HOXB-AS3 promotes myeloid cell proliferation and its higher expression is an adverse prognostic marker in myeloid malignancies [AML_normal]

Data table header descriptions
ID_REF
VALUE RMA normalized gene level expression values from Expression Console software

Data table
ID_REF VALUE
TC01000001.hg.1 5.985616
TC01000002.hg.1 3.595926
TC01000003.hg.1 3.549307
TC01000004.hg.1 3.90092
TC01000005.hg.1 11.05981
TC01000006.hg.1 17.70732
TC01000007.hg.1 17.36611
TC01000008.hg.1 8.495648
TC01000009.hg.1 4.554147
TC01000010.hg.1 3.349556
TC01000011.hg.1 6.649512
TC01000012.hg.1 4.831578
TC01000013.hg.1 12.99165
TC01000014.hg.1 4.139136
TC01000015.hg.1 6.248796
TC01000016.hg.1 8.862827
TC01000017.hg.1 4.990556
TC01000018.hg.1 9.86474
TC01000019.hg.1 4.78378
TC01000020.hg.1 4.441898

Total number of rows: 70523

Table truncated, full table size 1724 Kbytes.




Supplementary file Size Download File type/resource
GSM3152238_AML2018.CEL.gz 21.9 Mb (ftp)(http) CEL
Processed data included within Sample table

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