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Sample GSM3152229 Query DataSets for GSM3152229
Status Public on Jul 16, 2019
Title AML patient#091
Sample type RNA
 
Source name AML patient
Organism Homo sapiens
Characteristics subject status: acute myeloid leukemia (AML)
subject id: AML patient#091
tissue: bone marrow
cell type: mononucleated cells
Treatment protocol not applicable
Growth protocol Mononucleated cells from the bone marrow samples of the AML patients and the healthy controls
Extracted molecule total RNA
Extraction protocol TRIzol
Label biotin
Label protocol According to the protocols of Affymetrix Gene Expression Service Lab, Academia Sinica, Taiwan
 
Hybridization protocol According to the protocols of Affymetrix Gene Expression Service Lab, Academia Sinica, Taiwan
Scan protocol According to the protocols of Affymetrix Gene Expression Service Lab, Academia Sinica, Taiwan
Description AML2004
Data processing Data were processed using Expression Console software with RMA normalization.
probe group file: HTA-2_0.r3.pgf
meta-probeset file: HTA-2_0.r3.Psrs.mps
 
Submission date May 24, 2018
Last update date Jul 16, 2019
Contact name Huai-Hsuan Huang
E-mail(s) [email protected]
Organization name National Taiwan University Hospital
Department Internal Medicine
Street address No.7, Chong-Shan South Road, Zhongzheng Dist.
City Taipei City
State/province Taiwan
ZIP/Postal code 100
Country Taiwan
 
Platform ID GPL17586
Series (1)
GSE114868 Long non-coding RNA HOXB-AS3 promotes myeloid cell proliferation and its higher expression is an adverse prognostic marker in myeloid malignancies [AML_normal]

Data table header descriptions
ID_REF
VALUE RMA normalized gene level expression values from Expression Console software

Data table
ID_REF VALUE
TC01000001.hg.1 4.510786
TC01000002.hg.1 3.980416
TC01000003.hg.1 3.370121
TC01000004.hg.1 5.485664
TC01000005.hg.1 12.93645
TC01000006.hg.1 18.33306
TC01000007.hg.1 18.21923
TC01000008.hg.1 8.418777
TC01000009.hg.1 4.222043
TC01000010.hg.1 3.119792
TC01000011.hg.1 5.65595
TC01000012.hg.1 4.543002
TC01000013.hg.1 13.12784
TC01000014.hg.1 5.4399
TC01000015.hg.1 5.790929
TC01000016.hg.1 7.209134
TC01000017.hg.1 4.074583
TC01000018.hg.1 7.884296
TC01000019.hg.1 4.878424
TC01000020.hg.1 4.41821

Total number of rows: 70523

Table truncated, full table size 1724 Kbytes.




Supplementary file Size Download File type/resource
GSM3152229_AML2004.CEL.gz 22.4 Mb (ftp)(http) CEL
Processed data included within Sample table

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